| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1471 |
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| Symbol | sohB |
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| ID | 5587058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 1461061 |
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| End bp | 1462110 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640925163 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001462568 |
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| Protein GI | 157157433 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.251936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATTGT TGTCTGAATA TGGTTTGTTT TTGGCGAAAA TCGTTACCGT TGTGCTAGCG
ATTGCGGCGA TTGCCGCCAT TATTGTCAAT GTTGCTCAAC GTAATAAACG CCAGCGTGGC
GAGTTACGGG TCAACAATCT CAGCGAACAG TATAAGGAGA TGAAAGAAGA ACTGGCCGCG
GCGCTGATGG ACTCACATCA GCAAAAACAG TGGCACAAAG CGCAGAAGAA AAAGCACAAG
CAAGAAGCGA AAGCAGCAAA AGCGAAAGCC AAACTGGGCG AGGTGGCAAC TGACAGTAAA
CCTCGCGTCT GGGTGCTGGA TTTTAAAGGC AGCATGGACG CCCATGAAGT GAACTCGCTA
CGTGAAGAGA TAACGGCTGT ACTCGCAGCA TTCAAACCGC AGGATCAGGT TGTGCTACGT
CTGGAAAGCC CTGGTGGCAT GGTGCATGGT TACGGGTTGG CGGCTTCGCA GCTGCAGCGT
CTGCGTGATA AAAACATTCC TTTAACTGTT ACGGTAGACA AAGTCGCTGC CAGCGGCGGT
TACATGATGG CCTGTGTGGC GGACAAAATT GTTTCCGCAC CGTTTGCTAT TGTGGGTTCC
ATTGGGGTGG TGGCGCAAAT GCCCAACTTT AACCGCTTCC TGAAAAGCAA AGATATTGAT
ATCGAACTGC ACACTGCCGG GCAGTATAAG CGTACTCTGA CGTTGCTGGG TGACAATACC
GAAGAAGGGC GGGAGAAATT CCGCGAAGAG TTGAACGAAA CGCATCAGTT GTTTAAAGAT
TTTGTGAAGC GTATGCGTCC GTCTCTGGAT ATTGAACAGG TGGCAACGGG TGAACACTGG
TACGGACAAC AGGCGGTAGA GAAAGGCCTG GTTGATGAAA TCAACACCAG TGATGAAGTT
ATTCTTAGCC TGATGGAAGG CCGTGAAGTG GTTAATGTAC GCTATATGCA GCGTAAACGA
CTCATTGACC GATTCACCGG CAGCGCGGCA GAGAGCGCCG ATCGATTGTT GCTACGCTGG
TGGCAGCGGG GTCAAAAGCC ATTGATGTAA
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| Protein sequence | MELLSEYGLF LAKIVTVVLA IAAIAAIIVN VAQRNKRQRG ELRVNNLSEQ YKEMKEELAA
ALMDSHQQKQ WHKAQKKKHK QEAKAAKAKA KLGEVATDSK PRVWVLDFKG SMDAHEVNSL
REEITAVLAA FKPQDQVVLR LESPGGMVHG YGLAASQLQR LRDKNIPLTV TVDKVAASGG
YMMACVADKI VSAPFAIVGS IGVVAQMPNF NRFLKSKDID IELHTAGQYK RTLTLLGDNT
EEGREKFREE LNETHQLFKD FVKRMRPSLD IEQVATGEHW YGQQAVEKGL VDEINTSDEV
ILSLMEGREV VNVRYMQRKR LIDRFTGSAA ESADRLLLRW WQRGQKPLM
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