| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1337 |
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| Symbol | ldcA |
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| ID | 5590451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1332848 |
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| End bp | 1333762 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640925033 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001462442 |
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| Protein GI | 157155614 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0411006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCTGT TTCACTTAAT TGCCCCATCA GGTTACTGCA TTAAACAGCA CGCCGCGCTG
CGTGGTATCC AGCGCCTTAC CGACGCGGGG CATCAAGTCA ATAACGTCGA GGTTATTGCC
CGTCGTTGTG AGCGTTTTGC GGGTACGGAA ACAGAGCGTC TGGAAGATCT CAATTCCCTT
GCCAGACTGA CTACCCCCAA CACCATCGTG CTGGCTGTAC GCGGCGGTTA CGGTGCCAGT
CGTTTACTGG CAGATATTGA CTGGCAGGCA CTGGTGGCTC GCCAACAACA TGACCCGTTG
CTCATTTGCG GACATAGCGA TTTTACCGCC ATTCAGTGCG GTCTTCTGGC GCATGGCAAT
GTCATCACCT TTAGCGGCCC CATGCTGGTA GCAAACTTTG GCGCGGATGA ACTGAACGCC
TTTACCGAGC ACCATTTCTG GCTGGCGTTA CGCAATGAAA CCTTCACCAT TGAATGGCAA
GGGGAAGGCC CGACATGTCG GGCCGAAGGC ACGTTGTGGG GAGGCAATCT TGCGATGCTG
ATTTCACTGA TCGGTACACC GTGGATGCCA AAAATTGAGA ACGGTATTCT GGTGCTGGAA
GATATTAACG AGCACCCTTT CCGCGTCGAA CGTATGCTGT TGCAGCTCTA TCATGCGGGA
ATTTTGCCAC GTCAGAAGGC GATTATTCTC GGTAGCTTTA GCGGCAGCAC GCCCAATGAT
TATGACGCAG GTTACAACCT GGAGTCAGTG TACGCGTTTT TGCGTTCCCG CCTGTCGATT
CCACTCATTA CCGGCCTCGA TTTTGGTCAT GAACAACGCA CGGTTACGCT GCCGTTGGGC
GCACATGCCA TTCTGAATAA CACCCGGGAA GGCACTCAGT TGACGATTAG CGGTCATCCT
GTTCTTAAAA TGTAA
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| Protein sequence | MSLFHLIAPS GYCIKQHAAL RGIQRLTDAG HQVNNVEVIA RRCERFAGTE TERLEDLNSL
ARLTTPNTIV LAVRGGYGAS RLLADIDWQA LVARQQHDPL LICGHSDFTA IQCGLLAHGN
VITFSGPMLV ANFGADELNA FTEHHFWLAL RNETFTIEWQ GEGPTCRAEG TLWGGNLAML
ISLIGTPWMP KIENGILVLE DINEHPFRVE RMLLQLYHAG ILPRQKAIIL GSFSGSTPND
YDAGYNLESV YAFLRSRLSI PLITGLDFGH EQRTVTLPLG AHAILNNTRE GTQLTISGHP
VLKM
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