| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1303 |
|---|
| Symbol | |
|---|
| ID | 5590123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1304928 |
|---|
| End bp | 1306139 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640925000 |
|---|
| Product | BLUF/cyclic diguanylate phosphodiesterase domain-containing protein |
|---|
| Protein accession | YP_001462409 |
|---|
| Protein GI | 157154832 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACCA CCCTTATTTA TCGTAGCCAT ATACGTGACG ACGAACCTGT CAAAAAAATC
GAAGAAATGG TTTCGATAGC AAATCGCAGG AACATGCAGT CTGACGTAAC AGGGATCTTA
CTGTTTAATG GTTCTCATTT TTTCCAGCTT CTGGAAGGTC CGGAAGAACA GGTTAAAATG
ATATATCGGG CTATATGCCA GGATCCACGG CACTATAATA TTGTTGAGCT GCTGTGCGAT
TACGCGCCTG CTCGCCGTTT TGGCAAAGCG GGAATGGAAT TATTTGATTT GCGCCTGCAC
GAGCGAGATG ACGTTTTACA GGCCGTATTC GACAAAGGCA CATCAAAATT TCAGCTAACT
TATGATGACA GAGCGCTACA ATTTTTTCGT ACTTTTGTCC TTGCAACCGA ACAATCAACC
TATTTCGAGA TCCCTGCCGA AGACTCCTGG CTTTTTATCG CTGACGGATC TGATAAAGAA
CTTGATTCCT GTGCCCTTTC ACCAACTATA AACGACCACT TTGCCTTTCA TCCTATTGTC
GATCCCTTAT CGCGGCGGAT AATCGCTTTT GAAGCCATTG TGCAAAAAAA TGAAGATAGC
CCATCAGCCA TAGCGGTTGG GCAGCGTAAA GACGGGGAAA TCTACACAGC GGATCTCAAA
AGTAAGGCGC TTGCATTCAC GATGGCACAC GCACTTGAGC TCGGTGATAA AATGATTTCA
ATCAATCTAT TACCTATGAC CCTGGTTAAC GAACCTGACG CAGTCTCTTT TTTACTTAAT
GAAATAAAGG CCAATGCTCT GGTGCCTGAA CAAATCATCG TTGAATTTAC TGAAAGTGAA
GTCATATCTC GGTTTGATGA GTTTGCCGAA GCGATTAAAT CGCTAAAGGC TGCTGGTATC
AGTGTAGCAA TTGATCATTT TGGCGCAGGT TTTGCTGGTT TGTTACTCCT GTCACGCTTC
CAGCCTGACA GAATTAAAAT CAGTCAGGAA TTGATTACCA ATGTTCATAA AAGTGGGCCA
CGGCAGGCAA TTATTCAGGC GATCATAAAA TGCTGTACAT CACTTGAAAT TCAAGTCAGT
GCTATGGGCG TGGCAACACC AGAAGAGTGG ATGTGGCTTG AATCCGCAGG AATTGAGATG
TTTCAGGGAG ATCTGTTTGC TAAAGCTAAA TTGAATGGTA TCCCTTCCAT AGCGTGGCCA
GAGAAAAAAT AA
|
|---|
| Protein sequence | MLTTLIYRSH IRDDEPVKKI EEMVSIANRR NMQSDVTGIL LFNGSHFFQL LEGPEEQVKM
IYRAICQDPR HYNIVELLCD YAPARRFGKA GMELFDLRLH ERDDVLQAVF DKGTSKFQLT
YDDRALQFFR TFVLATEQST YFEIPAEDSW LFIADGSDKE LDSCALSPTI NDHFAFHPIV
DPLSRRIIAF EAIVQKNEDS PSAIAVGQRK DGEIYTADLK SKALAFTMAH ALELGDKMIS
INLLPMTLVN EPDAVSFLLN EIKANALVPE QIIVEFTESE VISRFDEFAE AIKSLKAAGI
SVAIDHFGAG FAGLLLLSRF QPDRIKISQE LITNVHKSGP RQAIIQAIIK CCTSLEIQVS
AMGVATPEEW MWLESAGIEM FQGDLFAKAK LNGIPSIAWP EKK
|
|---|
| |