Gene EcE24377A_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_1296 
SymbolmnmA 
ID5588042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp1298539 
End bp1299645 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content54% 
IMG OID640924993 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001462402 
Protein GI157156703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA CCGCAAAAAA AGTAATCGTC GGCATGTCCG GCGGTGTCGA TTCCTCCGTT 
TCTGCCTGGC TGTTGCAACA ACAGGGATAT CAGGTTGAAG GCCTGTTTAT GAAGAACTGG
GAAGAAGACG ACGGTGAGGA ATATTGCACA GCGGCAGCGG ATCTGGCTGA TGCCCAGGCT
GTCTGCGACA AGCTCGGCAT TGAACTGCAC ACCGTTAACT TTGCTGCCGA GTACTGGGAC
AACGTCTTCG AACTGTTCCT TGCCGAATAT AAAGCCGGTC GCACGCCGAA TCCGGATATT
CTGTGCAACA AAGAGATCAA ATTTAAAGCC TTCCTCGAAT TTGCCGCCGA AGATTTAGGT
GCCGATTATA TCGCTACCGG TCATTACGTA CGTCGGGCCG ATGTCGATGG CAAGAGCCGC
CTGCTGCGTG GTCTGGACAG CAATAAAGAC CAGAGCTACT TCCTTTATAC GCTCAGCCAT
GAGCAGATTG CGCAAAGCCT GTTCCCGGTC GGCGAACTGG AAAAACCGCA GGTGCGTAAG
ATTGCTGAAG ATCTTGGTCT GGTCACCGCG AAGAAAAAAG ACTCTACCGG CATTTGCTTC
ATTGGCGAAC GTAAATTCCG CGAGTTCCTG GGCCGTTATC TCCCGGCGCA ACCGGGCAAA
ATCATTACCG TCGATGGCGA TGAAATTGGT GAGCACCAGG GGCTGATGTA TCACACTCTC
GGTCAGCGTA AAGGTCTGGG TATCGGTGGC ACCAAAGAAG GTACCGAAGA ACCGTGGTAT
GTGGTGGACA AAGACGTCGA AAACAACATT CTGGTTGTCG CTCAGGGCCA TGAACACCCG
CGGCTGATGT CTGTCGGGTT GATTGCCCAG CAGTTGCACT GGGTCGATCG CGAACCATTC
ACCGGCACTA TGCGTTGCAC GGTAAAAACC CGCTATCGCC AGACCGATAT CCCTTGCACC
GTCAAGGCGC TGGACGATGA TCGCATTGAA GTGATTTTCG ATGAACCGGT TGCCGCCGTG
ACGCCGGGCC AGTCTGCCGT CTTCTATAAC GGTGAAGTGT GCCTCGGTGG CGGTATTATT
GAGCAGCGTC TGCCGCTGCC GGTCTGA
 
Protein sequence
MSETAKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA 
VCDKLGIELH TVNFAAEYWD NVFELFLAEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG
ADYIATGHYV RRADVDGKSR LLRGLDSNKD QSYFLYTLSH EQIAQSLFPV GELEKPQVRK
IAEDLGLVTA KKKDSTGICF IGERKFREFL GRYLPAQPGK IITVDGDEIG EHQGLMYHTL
GQRKGLGIGG TKEGTEEPWY VVDKDVENNI LVVAQGHEHP RLMSVGLIAQ QLHWVDREPF
TGTMRCTVKT RYRQTDIPCT VKALDDDRIE VIFDEPVAAV TPGQSAVFYN GEVCLGGGII
EQRLPLPV