| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1247 |
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| Symbol | potC |
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| ID | 5588762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1260284 |
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| End bp | 1261078 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640924945 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_001462357 |
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| Protein GI | 157158875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0802676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGGTC GACTGCTTCG CGGCGGTTTT ATGACCGCTA TCTACGCGTA CCTGTATATC
CCAATCATTA TTTTGATTGT GAACTCCTTT AACAGCTCGC GCTTTGGCAT CAACTGGCAG
GGTTTTACCA CCAAATGGTA TAGCCTGCTG ATGAACAACG ACAGCCTGTT ACAGGCAGCG
CAGCATTCAC TAACAATGGC GGTGTTTTCG GCGACATTTG CTACGCTTAT CGGTTCACTG
ACGGCAGTTG CGCTGTACCG TTATCGCTTT CGTGGTAAGC CGTTCGTTAG CGGAATGCTG
TTTGTGGTGA TGATGTCACC AGATATCGTG ATGGCGATTT CTCTGCTGGT GCTGTTTATG
CTGCTGGGTA TTCAGCTTGG CTTCTGGTCG CTGCTGTTCT CGCATATCAC CTTCTGCCTG
CCATTTGTGG TGGTGACGGT GTATTCGCGC CTGAAAGGTT TTGACGTGCG GATGCTGGAA
GCGGCGAAAG ATCTCGGTGC CAGCGAATTT ACCATTCTGC GAAAAATCAT TCTGCCACTG
GCAATGCCAG CGGTGGCGGC GGGCTGGGTG TTAAGCTTTA CCCTGTCGAT GGACGATGTG
GTAGTTTCTT CGTTCGTCAC CGGACCAAGT TATGAAATTC TGCCGTTAAA AATTTATTCG
ATGGTCAAAG TCGGCGTATC GCCGGAAGTT AACGCGCTGG CAACCATATT ACTGGTGCTG
TCGCTGGTGA TGGTTATTGC CAGCCAGCTT ATTGCTCGTG ATAAAACGAA AGGTAACACA
GGGGACGTTA AATGA
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| Protein sequence | MIGRLLRGGF MTAIYAYLYI PIIILIVNSF NSSRFGINWQ GFTTKWYSLL MNNDSLLQAA
QHSLTMAVFS ATFATLIGSL TAVALYRYRF RGKPFVSGML FVVMMSPDIV MAISLLVLFM
LLGIQLGFWS LLFSHITFCL PFVVVTVYSR LKGFDVRMLE AAKDLGASEF TILRKIILPL
AMPAVAAGWV LSFTLSMDDV VVSSFVTGPS YEILPLKIYS MVKVGVSPEV NALATILLVL
SLVMVIASQL IARDKTKGNT GDVK
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