Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1179 |
Symbol | |
ID | 5587837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1195944 |
End bp | 1196510 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640924878 |
Product | nickel-dependent hydrogenase b-type cytochrome subunit |
Protein accession | YP_001462290 |
Protein GI | 157157617 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTCA CAAATACCCC TGAACGCTAT GGTGTTATAT CTGCGGCCTT CCATTGGCTA AGCGCAATTA TTGTCTACGG CATGTTTGCT TTAGGTCTGT GGATGGTCAC GCTCAGTTAT TACGATGGCT GGTATCACAA AGCACCCGAA CTGCATAAAA GCATCGGTAT TTTGTTAATG ATGGGGCTGG TTATTCGCGT TCTGTGGCGT GTCATATCTC CACCGCCGGG TCCGCTGCCG AGTTATTCGC CCATGACTCG TCTTGCCGCA AAAGCTGGAC ATCTCGCATT GTACCTATTG CTGTTCGCCA TCGGCATCAG CGGCTATCTG ATCTCAACTG CCGATGGTAA ACCGATCAGC GTTTTTGGCT GGTTTGACGT CCCCGCGACC CTTGCCGACG CTGGCGCACA GGCAGACTTT GCCGGTGCCC TGCATTTTTG GCTCGCGTGG AGCGTCGTAG TACTGTCCGT TATGCACGGA TTTATGGCCC TGAAGCATCA TTTCATCGAT AAAGACGACA CTCTGAAGCG CATGCTGGGA AAGTCGTCAT CTGACTATGG AGTATAA
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Protein sequence | MSFTNTPERY GVISAAFHWL SAIIVYGMFA LGLWMVTLSY YDGWYHKAPE LHKSIGILLM MGLVIRVLWR VISPPPGPLP SYSPMTRLAA KAGHLALYLL LFAIGISGYL ISTADGKPIS VFGWFDVPAT LADAGAQADF AGALHFWLAW SVVVLSVMHG FMALKHHFID KDDTLKRMLG KSSSDYGV
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