Gene EcE24377A_1078 details

Gene Information

• Locus tag: EcE24377A_1078
• Symbol: mgsA
• ID: 5587017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 1105218
• End bp: 1105676
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640924782
• Product: methylglyoxal synthase
• Protein accession: YP_001462196
• Protein GI: 157156482
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1803] Methylglyoxal synthase
• TIGRFAM ID: [TIGR00160] methylglyoxal synthase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000000897908
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGA CGACTCGCAC TTTACCTGCG CGGAAACATA TTGCGCTGGT GGCACACGAT 
CACTGCAAAC AAATGCTGAT GAGCTGGGTG GAACGGCATC AACCGTTACT GGAACAACAC 
GTACTGTATG CAACAGGCAC TACCGGTAAC TTGATTTCCC GTGCAACCGG CATGAACGTC 
AACGCGATGT TGAGTGGCCC AATGGGGGGT GACCAGCAGG TTGGCGCATT GATCTCAGAA 
GGGAAAATTG ATGTATTGAT TTTCTTCTGG GACCCACTAA ATGCCGTGCC GCACGATCCT 
GACGTGAAAG CCTTGTTGCG TCTGGCGACG GTATGGAACA TTCCGGTCGC CACCAACGTG 
GCAACGGCAG ACTTCATAAT CCAGTCGCCG CATTTCAACG ACGCGGTCGA TATTCTGATC 
CCCGATTATC AGCGTTATCT CGCGGACCGT CTGAAGTAA 

 

Protein sequence

MELTTRTLPA RKHIALVAHD HCKQMLMSWV ERHQPLLEQH VLYATGTTGN LISRATGMNV 
NAMLSGPMGG DQQVGALISE GKIDVLIFFW DPLNAVPHDP DVKALLRLAT VWNIPVATNV 
ATADFIIQSP HFNDAVDILI PDYQRYLADR LK