| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1059 |
|---|
| Symbol | |
|---|
| ID | 5589662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 1082570 |
|---|
| End bp | 1083307 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640924763 |
|---|
| Product | putativi pili assembly chaperone |
|---|
| Protein accession | YP_001462177 |
|---|
| Protein GI | 157157571 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000349289 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCGC GACATTTGTA CTTCATTATG ACTAATACGT GGAACAGATT GGCGCTCTTG
ATTTTCGCCG TTTTATCGCT GCTGGTGGCG GGTGAATTGC AGGCAGGAGT GGTGGTCGGC
GGAACGCGAT TTATCTTTCC GGCAGACAGA GAATCGATAT CTATTTTACT GACTAATACC
AGTCAGGAAT CCTGGCTTAT TAACAGCAAA ATCAACCGCC CAACGCGTTG GGCCGGGGGG
GAAGCGTCGA CAGTGCCAGC ACCATTACTG GCCGCTCCGC CACTTATTCT CCTGAAGCCC
GGTACTACAG GCACGTTGCG CTTGCTGAGA ACGGAAAGCG ACATCTTGCC TGTGGATCGC
GAAACGCTAT TTGAGTTAAG CATTGCCAGC GTGCCATCCG GCAAAGTTGA AAATCAGAGC
GTAAAAGTGG CGATACGCTC GGTATTTAAA CTGTTCTGGC GACCCGAAGG TTTGCCGGGC
GACCCGCTAG AAGCTTATCA ACAATTACGC TGGACATGGA ATTCGCAGGG TGTACAACTC
ACTAACCCAA CGCCTTACTA CATTAACCTG ATTCAGGTGA GCGTAAATGG TAAAGCGTTA
AGTAATGCGG GAGTTGTGCC GCCTAAAAGC CAGCGTCAGA CAAGCTGGTG TCAGGCAATC
GCACCGTGTC ATGTCGCCTG GCGGGCGATA AATGATTACG GCGGGTTGAG TGCAAAGAAG
GAGCAAAATC TGCCCTGA
|
|---|
| Protein sequence | MPARHLYFIM TNTWNRLALL IFAVLSLLVA GELQAGVVVG GTRFIFPADR ESISILLTNT
SQESWLINSK INRPTRWAGG EASTVPAPLL AAPPLILLKP GTTGTLRLLR TESDILPVDR
ETLFELSIAS VPSGKVENQS VKVAIRSVFK LFWRPEGLPG DPLEAYQQLR WTWNSQGVQL
TNPTPYYINL IQVSVNGKAL SNAGVVPPKS QRQTSWCQAI APCHVAWRAI NDYGGLSAKK
EQNLP
|
|---|
| |