Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1053 |
Symbol | |
ID | 5588923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1076515 |
End bp | 1077057 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640924757 |
Product | fimbrial protein |
Protein accession | YP_001462171 |
Protein GI | 157156929 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.165848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GTGTATTGAC GGCGTTTATA ACTGTGGTAT GTGCAACGTC CAGCGTTATG GCAGCTGATG ATAATGCTAT CACGGATGGC AAAGTAACAT TTAATGGTAA AGTTATTGCT CCAGCTTGTA CCCTGGTAGC TGCGACGAAA GATTCAGTAG TCACATTGCC AAATGTCAGC GCCACCAAGT TGCAAACTAA TGGAGCAGTC TCTGGCGTTA AAACTGATGT ACCAATTGCC TTAGAAGGCT GTGATGTTAC TGTAACTAAA AATGCGACGT TTACCTTTAG TGGTACGGCT GACGGCGTGC AACCTACAGC ATTTGCCAAC CAGGCTACCA CCGATGCAGC GACGAATGTT GCTCTACAAA TGTATCTGCC AGATGGTTCT ACATCGGTAA CTCCCGGTAC CGAAACGTCG AATATTCAGT TAGCGGATTC TGCTGAGCAA ACAGTGACCT TTAAAGTTGA TTATATCGCT ACGGGGAAAG CGACTTCTGG TAATGTGAAT GCGGTAACAA ATTTCCATAT TAACTATTAT TAA
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Protein sequence | MKKSVLTAFI TVVCATSSVM AADDNAITDG KVTFNGKVIA PACTLVAATK DSVVTLPNVS ATKLQTNGAV SGVKTDVPIA LEGCDVTVTK NATFTFSGTA DGVQPTAFAN QATTDAATNV ALQMYLPDGS TSVTPGTETS NIQLADSAEQ TVTFKVDYIA TGKATSGNVN AVTNFHINYY
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