Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1031 |
Symbol | pncB |
ID | 5588986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1055066 |
End bp | 1056268 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640924737 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001462151 |
Protein GI | 157159189 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00456308 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAGTTG CATATGCAGC AAGCCGTGTT TCATCACTAT TACGATGTGC ATGTCGCGGC GGAGTTTCGT TGCCGAGGTG ACGATCTGCT GGGTATTTAT GCCGATGCTA TTCGTGAACA GATTCAGGCG ATGCAGCACC TGCGCCTGCA GGATGATGAA TATCAGTGGC TCTCTGCCCT GCCTTTCTTT AAGGCCGACT ATCTTAACTG GTTACGCGAG TTCCGCTTTA ACCCGGAACA AGTCACCGTA TCCAACGATA ATGGCAAGCT GGATATTCGT TTAAGCGGCC CGTGGCGTGA AGTCATCCTC TGGGAAGTTC CTTTGCTGGC GGTTATCAGT GAAATGGTAC ATCGCTATCG CTCACCGCAG GCCGACGTTG CGCAAGCCCT CGACACGCTG GAAAGCAAAT TAGTCGACTT CTCGGCGTTA ACCGCCGGCC TTGATATGTC GCGCTTCCAT CTTATGGATT TTGGCACCCG TCGCCGTTTT TCTCGCGAAG TACAAGAAAC CATCGTTAAG CGTCTGCAAC AGGAATCCTG GTTCGTGGGC ACCAGCAACT ACGATCTGGC GCGTCGGCTT TCCCTCACGC CGATGGGAAC ACAGGCACAC GAATGGTTCC AGGCACATCA GCAAATCAGC CCGGATCTAG CCAACAGCCA GCGAGCTGCA CTTGCTGCCT GGCTGGAAGA GTATCCCGAC CAACTTGGCA TTGCATTAAC CGACTGCATC ACTATGGATG CTTTCCTGCG TGATTTCGGT GTCGAGTTCG CTAGTCGGTA TCAGGGCCTG CGTCATGACT CTGGCGACCC GGTTGAATGG GGTGAAAAAG CCATTGCACA TTATGAAAAG CTGGGAATTG ATCCACAGAG TAAAACGCTG GTTTTCTCTG ACAATCTGGA TTTACGCAAA GCGGTTGAGC TATACCGCCA CTTCTCTTCC CGCGTGCAAT TAAGTTTTGG TATTGGGACT CGCCTGACCT GCGATATCCC CCAGGTAAAA CCCCTGAATA TTGTGATTAA GTTGGTTGAG TGTAACGGTA AACCGGTGGC GAAACTTTCT GACAGCCCTG GCAAAACTAT CTGCCACGAT AAAGCGTTTG TTCGGGCGCT GCGCAAAGCG TTCGACCTTC CGCATATTAA AAAAGCCAGT TAA
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Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVHVAAEFR CRGDDLLGIY ADAIREQIQA MQHLRLQDDE YQWLSALPFF KADYLNWLRE FRFNPEQVTV SNDNGKLDIR LSGPWREVIL WEVPLLAVIS EMVHRYRSPQ ADVAQALDTL ESKLVDFSAL TAGLDMSRFH LMDFGTRRRF SREVQETIVK RLQQESWFVG TSNYDLARRL SLTPMGTQAH EWFQAHQQIS PDLANSQRAA LAAWLEEYPD QLGIALTDCI TMDAFLRDFG VEFASRYQGL RHDSGDPVEW GEKAIAHYEK LGIDPQSKTL VFSDNLDLRK AVELYRHFSS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPHIKKAS
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