| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0981 |
|---|
| Symbol | |
|---|
| ID | 5587204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1000694 |
|---|
| End bp | 1001689 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640924690 |
|---|
| Product | phage integrase family site specific recombinase |
|---|
| Protein accession | YP_001462104 |
|---|
| Protein GI | 157155436 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.896677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATTA AAAAGCTCGA TGATGGTCGT TATGAAGTGG ACGTCAGACC GCAGGGTGCA
GATGGAAAAC GTATCAGGCG GAAATTTAAA ACTAAAGGTG AAGCTCAGGC ATTCGAACGT
CATGTATTGG TTAACTACCA CAACAAAGAG TGGTTGGAGA AACCAGCCGA CCGCCGAACT
CTTACAGAGT TGTTAGGTAG ATGGTGGATA TATCACGGAA AATCACATGA GCGTGGAGAT
ATTGAACGGG GGCGTTTAAC GACAATAATC GCCAAATTTG CAGAAATGGG AGTGTCCAGA
GCTGACCAGC TAACAAAGAA AACGATAACT GATTATCGCG TTGTAATGAT GAACGATGGT
CTAAAACCAG CCAGCGTAAA TCGACATCTG GCAATAATGA GCGGGATGTT CACCAAGTTA
ATTGACGCCG GTGAATACCA CTCCCACAAC CCGTTCCGTG AGATTAAACG GTTACGTGAA
GCTGTTACGG AAATGGCTTT TTTGTCCAGT GAAGAGATTA CGCGGCTGTT ATCCATGCTT
GATGGTGATG AATTAAATGC AACTCTGGTC TGCCTTTCTA CTGGTGGACG CTGGAGTGAA
GTGTCTAATT TAAAAGCTGA ACACATCATT AACCAGATGG TTACGTTTAT GAAAACTAAA
AACGGAAAAC GCAGGACAAT TCCCGTTTCG CAGGACCTGA TTAAACGGAT CAAGACCAAA
AATTCAGGCA GGCTTTTTAA TGCCAGTTAC TACAAAGTGC GTAACGCTCT CAGGGAAGTA
AAACCCGATT TACCTGACGG ACAAGCAGTA CATGTTTTGA GGCATACATT TGCCACACAT
TTTATAATGA ATGGAGGTAA CATAATCACA TTGCAGCGCA TCCTGGGTCA TTCTAACATT
CAGCAAACTA TGACCTACGC ACACTTTGCA CCGGATTTCT TACAAGATGC TGTGACTCTT
AACCCGGTGT CAGGAATGTC CATAATGCGT CCATAA
|
|---|
| Protein sequence | MSIKKLDDGR YEVDVRPQGA DGKRIRRKFK TKGEAQAFER HVLVNYHNKE WLEKPADRRT
LTELLGRWWI YHGKSHERGD IERGRLTTII AKFAEMGVSR ADQLTKKTIT DYRVVMMNDG
LKPASVNRHL AIMSGMFTKL IDAGEYHSHN PFREIKRLRE AVTEMAFLSS EEITRLLSML
DGDELNATLV CLSTGGRWSE VSNLKAEHII NQMVTFMKTK NGKRRTIPVS QDLIKRIKTK
NSGRLFNASY YKVRNALREV KPDLPDGQAV HVLRHTFATH FIMNGGNIIT LQRILGHSNI
QQTMTYAHFA PDFLQDAVTL NPVSGMSIMR P
|
|---|
| |