Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0944 |
Symbol | poxB |
ID | 5588123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 958721 |
End bp | 960439 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640924654 |
Product | pyruvate dehydrogenase |
Protein accession | YP_001462069 |
Protein GI | 157158121 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.987106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA CGGTTGCAGC TTATATCGCC AAAACACTCG AATCGGCAGG GGTGAAACGC ATCTGGGGAG TCACAGGCGA CTCTCTGAAC GGTCTTAGTG ACAGTCTTAA TCGCATGGGC ACCATCGAGT GGATGTCCAC CCGCCACGAA GAAGTGGCGG CCTTTGCCGC TGGCGCTGAA GCACAACTTA GCGGAGAACT GGCGGTCTGT GCCGGATCGT GCGGCCCCGG CAACCTGCAC TTAATCAACG GCCTGTTCGA TTGCCACCGC AATCACGTTC CGGTACTGGC GATTGCCGCT CATATTCCCT CCAGCGAAAT TGGCAGCGGC TATTTCCAGG AAACCCACCC ACAAGAGCTA TTCCGCGAAT GTAGTCACTA TTGCGAGCTG GTTTCCAGCC CGGAGCAGAT TCCACAAGTA CTGGCGATTG CCATGCGCAA AGCGGTGCTT AACCGTGGCG TTTCGGTTGT CGTGTTACCA GGCGACGTGG CGTTAAAACC TGCGCCAGAA GGGGCAACCA CGCACTGGTA TCATGCGCCA CAACCAATCG TGACGCCGGA AGAAGAAGAG TTACGCAAAC TGGCGCAACT GCTGCGTTAT TCCAGCAATA TCGCCCTGAT GTGTGGCAGC GGCTGCGCGG GGGCGCATAA AGAGTTAGTT GAGTTTGCCG GGAAAATTAA AGCGCCTATT GTTCATGCCC TGCGCGGTAA AGAACATGTC GAATACGATA ATCCGTATGA TGTTGGAATG ACCGGGTTAA TCGGCTTCTC GTCAGGTTTC CATACCATGA TGAACGCCGA CACGTTAGTG CTACTCGGTA CTCAGTTCCC CTACCGTGCG TTCTACCCGA CCGATGCCAA AATTATTCAG ATTGATATCA ATCCAGCCAG CATCGGCGCG CATAGCAAGG TAGATATGGC GCTGGTCGGC GATATCAAAT CAACCCTGCG CGCATTGCTG CCACTGGTGG AAGAAAAAAC CGATCGCAAG TTTCTGGATA CAGCGCTGGA AGATTACCGC GATGCCCGCA AAGGGCTGGA CGATTTAGCT AAACCGAGCG AGAAAGCCAT TCACCCGCAA TATCTGGCGC AGCAAATTAG TCATTTTGCC GCCGATGATG CCATCTTTAC CTGTGACGTC GGCACGCCAA CGGTATGGGC GGCACGTTAT CTGAAAATGA ACGGCAAGCG TCGCCTGTTA GGTTCGTTTA ACCACGGTTC GATGGCTAAC GCCATGCCGC AGGCGCTGGG TGCGCAGGCG ACAGAGCCAG AACGTCAGGT GGTCGCCATG TGCGGCGATG GCGGTTTTAG CATGTTGATG GGCGATTTCC TCTCAGTAGT GCAGATGAAA CTGCCAGTGA AAATTGTCGT CTTTAACAAC AGCGTGCTGG GCTTTGTGGC GATGGAGATG AAAGCTGGTG GCTATTTGAC TGACGGCACC GAACTACACG ACACAAACTT TGCCCGCATT GCCGAAGCGT GCGGCATTAC GGGTATCCGT GTAGAAAAAG CGTCTGAAGT TGATGAAGCC CTGCAACGCG CCTTCTCTAT CGACGGTCCG GTGTTGGTGG ATGTGGTGGT CGCCAAAGAA GAGTTAGCCA TTCCACCGCA GATCAAACTC GAACAGGCCA AAGGTTTTAG CCTGTATATG TTGCGCGCAA TTATCAGCGG ACGCGGCGAT GAAGTGATCG AACTGGCGAA AACGAACTGG CTAAGGTAA
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Protein sequence | MKQTVAAYIA KTLESAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMSTRHE EVAAFAAGAE AQLSGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE GATTHWYHAP QPIVTPEEEE LRKLAQLLRY SSNIALMCGS GCAGAHKELV EFAGKIKAPI VHALRGKEHV EYDNPYDVGM TGLIGFSSGF HTMMNADTLV LLGTQFPYRA FYPTDAKIIQ IDINPASIGA HSKVDMALVG DIKSTLRALL PLVEEKTDRK FLDTALEDYR DARKGLDDLA KPSEKAIHPQ YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA TEPERQVVAM CGDGGFSMLM GDFLSVVQMK LPVKIVVFNN SVLGFVAMEM KAGGYLTDGT ELHDTNFARI AEACGITGIR VEKASEVDEA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
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