Gene EcE24377A_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0929 
SymbolpotI 
ID5588344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp946498 
End bp947343 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID640924639 
Productputrescine transporter subunit: membrane component of ABC superfamily 
Protein accessionYP_001462054 
Protein GI157158340 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TACCGGTAGT TCGTTCGCCC TGGCGGATTG TGATTTTGCT GCTGGGCTTT 
ACCTTTCTCT ACGCGCCAAT GCTGATGCTG GTTATCTATT CGTTTAACAG CTCGAAGCTG
GTGACGGTGT GGGCCGGCTG GTCAACGCGC TGGTATGGTG AGTTATTGCG CGATGACGCG
ATGATGAGTG CGGTTGGTTT AAGCCTGACA ATTGCTGCCT GTGCGGCAAC GGCGGCGGCG
ATCCTCGGGA CTATTGCGGC GGTGGTGCTG GTGCGCTTTG GCAGGTTTCG CGGATCAAAT
GGCTTTGCCT TTATGATCAC CGCGCCGCTG GTGATGCCAG ATGTCATCAC GGGCTTGTCG
CTGTTGTTAT TATTCGTCGC GCTTGCTCAT GCCATTGGCT GGCCTGCGGA CCGCGGTATG
CTCACCATCT GGCTGGCGCA TGTCACTTTT TGTACGGCTT ATGTGGCGGT CGTTATTTCT
TCAAGATTGC GGGAACTGGA TCGCTCGATA GAAGAAGCAG CGATGGATCT CGGTGCGACG
CCGCTGAAAG TGTTTTTCGT CATTACGCTA CCGATGATCA TGCCCGCGAT CATTTCTGGC
TGGTTACTGG CTTTTACTTT GTCGCTTGAT GATCTGGTGA TCGCCAGCTT TGTTTCCGGG
CCGGGAGCCA CCACGTTACC GATGCTGGTC TTTTCCAGCG TGCGGATGGG GGTGAATCCG
GAAATCAACG CCCTTGCAAC GTTAATTCTC GGTGCGGTCG GAATTGTCGG ATTTATCGCC
TGGTATCTGA TGGCTCGCGC AGAAAAACAG CGGATACGCG ATATCCAGCG TGCAAGACAT
GGCTGA
 
Protein sequence
MNNLPVVRSP WRIVILLLGF TFLYAPMLML VIYSFNSSKL VTVWAGWSTR WYGELLRDDA 
MMSAVGLSLT IAACAATAAA ILGTIAAVVL VRFGRFRGSN GFAFMITAPL VMPDVITGLS
LLLLFVALAH AIGWPADRGM LTIWLAHVTF CTAYVAVVIS SRLRELDRSI EEAAMDLGAT
PLKVFFVITL PMIMPAIISG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
EINALATLIL GAVGIVGFIA WYLMARAEKQ RIRDIQRARH G