Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0904 |
Symbol | |
ID | 5588903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 922394 |
End bp | 924742 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640924614 |
Product | cyclic diguanylate phosphodiesterase domain-containing protein |
Protein accession | YP_001462029 |
Protein GI | 157156658 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGTT TATACGAAAA GATAAAGATA AGGCTGATAA TTTTATTTTT ATTGGCAGCA CTGTCATTTA TTGGTCTTTT TTTCATCATT AACTATCAAC TGGTATCGGA ACGCGCGGTA AAACGTGCCG ATAGCCGCTT TGAACTTATT CAGAAAAACG TTGGCTATTT CTTTAAAGAT ATTGAACGTT CGGCCCTGAC ATTAAAGGAC TCACTGTATT TATTAAAAAA TACAGAGGAG ATTCAACGCG CCGTGATTCT GAAAATGGAA ATGATGCCAT TTTTAGACTC GGTGGGACTG GTACTTGATG ATAATAAATA TTATCTCTTT TCGCGGAGGG CGAATGATAA AATCGTTGTT TATCATCAGG AACAAGTAAA TGGACCGCTT GTCGACGAGT CAGGGCGGGT TATTTTTGCC GATTTTAACC CATCGAAACG ACCGTGGTCG GTGGCTTCAG ATGACTCTAA CAACAGCTGG AATCCGGCAT ACAATTGCTT TGATCGTCCG GGTAAAAAAT GTATCTCTTT TACGCTACGT ATCAACGGCA AAGATCACGA TTTGTTAGCG GTAGATAAAA TTCATGTCGA TTTAAACTGG CGGTATCTGA ACGAGTATCT TGATCAAATC AGCGCTAATG ATGAAGTTCT ATTTTTGAAA CAAGGTCATG AGATCATTGC CAAGAATCAA CTCGCTCGTG AAAAACTGAT TATTTATAAT AGCGAAGGTA ATTATAATAT TATTGATTCT GTCGATACGG AGTATATTGC AAAGACATCA GCAGTGCCAA ATAATGCATT GTTCGAAATC TATTTTTATT ATCCTGGCGG TAATTTATTG AACGCATCAG ATAAACTTTT TTATCTACCG TTTGCGTTCA TTATTATCGT GTTGCTGGTG GTATATTTCA TGACCACTCG TGTGTTCCGT CGGCAATTTT CTGAAATGAC CGAGCTGGTT AATACGCTGG CGTTTTTGCC CGACTCAACG GATCAGATCG AGGCTCTGAA AATTCGCGAA GGCGATGCGA AAGAGATTAT CAGCATCAAA AATTCGATCG CGGAAATGAA AGATGCCGAA ATTGAACGGT CAAATAAATT GCTCTCACTG ATCTCTTACG ATCAGGAAAG CGGTTTTATT AAAAATATGG CGATTATTGA GTCCAACAAT AATCAGTATC TGGCTGTGGG GATCATCAAA CTGTGTGGTC TGGAAGCCGT GGAAGCGGTG TTTGGTGTTG ATGAACGCAA TAAAATCGTC AGGAAATTGT GTCAGCGAAT TGCCGAGAAA TATGCGCAAT GCTGCGATAT CGTGACATTC AATGCCGATC TCTATTTACT TCTGTGTCGG GAAAATGTAC AGACATTTAC CCGTAAAATA GCGATGGTAA ACGATTTTGA CAGCAGCTTT GGCTACCGCA ATCTGCGCAT CCATAAGTCT GCCATTTGTG AACCTTTGCA GGGGGAAAAC GCCTGGAGTT ACGCAGAAAA ACTGAAACTG GCGATTTCCA GTATCCGTGA CCATATGTTC TCCGAGTTTA TTTTCTGTGA TGACGCGAAA CTCAACGAAA TAGAAGAGAA TATCTGGATT GCGCGTAATA TTCGCCATGC AATGGAAATT GGCGAACTAT TCCTCGTCTA TCAACCGATC GTTGATATTA ACACCCGCGC CATTCTGGGC GCGGAGGCGT TGTGCCGTTG GGTTTCTGCG GAGCGGGGGA TCATTTCACC GCTGAAGTTC ATTACCATTG CTGAAGATAT CGGGTTTATC AATGAGCTGG GTTATCAGAT TATTAAAACG GCAATGGGTG AATTCAGACA TTTTAGTCAG CGTGCGTCGC TGAAGGATGA TTTCTTACTG CATATTAATG TTTCGCCCTG GCAGTTAAAC GAACCGCACT TTCATGAGCG TTTTACCACC ATCATGAAAG AAAATGGCCT GAAGGCGAAC AGCCTCTGTG TTGAGATCAC TGAAACCGTG ATCGAGCGAA TTAATGAACA TTTTTATCTC AATATTGAAC AACTGCGTAA ACAAGGGGTA CGGATATCGA TTGATGACTT TGGCACCGGT TTGTCAAACC TGAAACGTTT TTATGAAATT AATCCAGACA GCATAAAGGT GGACTCGCAA TTTACCGGCG ATATTTTCGG TACTGCGGGA AAAATTGTGC GCATTATTTT CGATCTGGCA CGCTATAACC GGATCCCGGT GATTGCGGAA GGCGTAGAGA GCGAAGACGT TGCGCGCGAA TTAATTAAAT TAGGATGTGT TCAGGCTCAG GGGTATCTGT ACCAGAAACC CATGCCATTC TCCGCCTGGG ATAAAAGTGG AAAATTAGTA AAAGAGTAG
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Protein sequence | MLSLYEKIKI RLIILFLLAA LSFIGLFFII NYQLVSERAV KRADSRFELI QKNVGYFFKD IERSALTLKD SLYLLKNTEE IQRAVILKME MMPFLDSVGL VLDDNKYYLF SRRANDKIVV YHQEQVNGPL VDESGRVIFA DFNPSKRPWS VASDDSNNSW NPAYNCFDRP GKKCISFTLR INGKDHDLLA VDKIHVDLNW RYLNEYLDQI SANDEVLFLK QGHEIIAKNQ LAREKLIIYN SEGNYNIIDS VDTEYIAKTS AVPNNALFEI YFYYPGGNLL NASDKLFYLP FAFIIIVLLV VYFMTTRVFR RQFSEMTELV NTLAFLPDST DQIEALKIRE GDAKEIISIK NSIAEMKDAE IERSNKLLSL ISYDQESGFI KNMAIIESNN NQYLAVGIIK LCGLEAVEAV FGVDERNKIV RKLCQRIAEK YAQCCDIVTF NADLYLLLCR ENVQTFTRKI AMVNDFDSSF GYRNLRIHKS AICEPLQGEN AWSYAEKLKL AISSIRDHMF SEFIFCDDAK LNEIEENIWI ARNIRHAMEI GELFLVYQPI VDINTRAILG AEALCRWVSA ERGIISPLKF ITIAEDIGFI NELGYQIIKT AMGEFRHFSQ RASLKDDFLL HINVSPWQLN EPHFHERFTT IMKENGLKAN SLCVEITETV IERINEHFYL NIEQLRKQGV RISIDDFGTG LSNLKRFYEI NPDSIKVDSQ FTGDIFGTAG KIVRIIFDLA RYNRIPVIAE GVESEDVARE LIKLGCVQAQ GYLYQKPMPF SAWDKSGKLV KE
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