Gene EcE24377A_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0876 
Symbol 
ID5588938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp891432 
End bp893657 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content54% 
IMG OID640924587 
Producthypothetical protein 
Protein accessionYP_001462002 
Protein GI157154896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000367014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTGGA TCCTGTTCAT CCTCTTCTGC CTGCTGGGCG CACCTGCCCA CGCGGTATCC 
ATACCCGGCG TTACAACCAC AACGACAACG GACTCAACGA CTGAACCGGC CCCGGAACCG
GATATCGAAC AAAAAAAAGC GGCCTATGGC GCACTGGCGG ATGTGCTGGA TAACGACACC
TCGCGTAAAG AATTGATCGA CCAGTTGCGT ACTGTCGCCG CGACGCCCCC TGCGGAACCG
GTCCCGAAGA TCGTGCCGCC GACGCTGGTT GAAGAGCAAA CCGTGCTGCA AAAGGTCACC
GAAGTCAGCC GCCATTATGG TGAAGCCCTT TCCGCCCGCT TCGGACAACT TTATCGCAAT
ATCACCGGCT CCCCGCATAA GCCGTTTAAT CCACAAACCT TCAGCAATGC GTTGACCCAT
TTTTCAATGT TAGCGGTATT AGTGTTTGGT TTTTACTGGC TGATTCGTCT GTGCGCACTG
CCGCTGTATC GCAAAATGGG CCAGTGGGCG CGGCAAAAAA ATCGCGAACG CAGCAACTGG
CTGCAGCTTC CGGCGATGAT TATCGGGGCG TTTATTATCG ACCTACTGTT ACTGGCACTG
ACATTGTTTG TCGGCCAGGT ATTAAGCGAC AACCTGAATG CGGGCAGTCG CACCATCGCT
TTCCAACAAA GTTTGTTTCT CAACGCCTTT GCCCTGATTG AATTTTTCAA AGCCGTACTA
CGCCTGATTT TTTGCCCAAA CGTGGCTGAA CTGCGCCCGT TCACGATTCA GGACGAGAGC
GCCCGTTACT GGAGTCGTCG CCTGAGCTGG TTAAGCAGTT TGATAGGTTA TGGCCTGATT
GTGGCCGTGC CGATTATCTC TAATCAGGTG AATGTACAGA TAGGTGCGCT GGCGAACGTC
ATCATTATGC TGTGCATGAC CGTCTGGGCG TTGTACCTGA TCTTTCGCAA TAAAAAAGAG
ATTACCCAAC ATTTGCTCAA CTTTGCGGAG CATTCGCTGG CCTTTTTCAG CCTGTTTATC
CGCGCCTTTG CGCTGGTGTG GCACTGGCTG GCAAGCGCCT ATTTTATCGT GCTGTTTTTC
TTTTCGTTGT TCGATCCGGG CAACAGCCTG AAATTTATGA TGGGTGCAAC GGTGCGCAGC
CTGGCGATTA TTGGTATCGC AGCGTTTGTT TCCGGTATGT TTTCCCGCTG GCTGGCGAAA
ACCATCACCC TCTCGCCACA TACTCAGCGT AACTATCCGG AGCTACAAAA ACGGCTGAAT
GGCTGGCTTT CGGCGGCGCT GAAAACGGCG CGTATTCTGA CCGTCTGCGT GGCGGTAATG
TTGCTGTTGA GCGCATGGGG ATTGTTCGAT TTCTGGAACT GGCTGCAAAA CGGCGCGGGG
CAGAAAACCG TAGATATCCT GATCCGCATC GCACTCATTC TTTTCTTCTC GGCGGTTGGC
TGGACAGTGC TCGCCAGTTT GATCGAAAAC CGGCTGGCTT CGGATATTCA TGGCCGCCCG
CTACCCAGCG CCCGTACGCG TACCCTGCTG ACGCTGTTCC GTAACGCGCT GGCGGTGATT
ATCAGTACCA TCACCATCAT GATTGTGTTG TCGGAAATCG GCGTCAATAT CGCGCCATTG
CTGGCAGGTG CTGGGGCATT AGGTCTGGCT ATCTCGTTTG GTTCGCAAAC GCTGGTGAAA
GATATTATCA CCGGGGTATT TATTCAGTTT GAAAACGGCA TGAACACTGG AGATTTGGTT
ACTATCGGGC CGTTGACCGG CACTGTGGAA CGGATGTCGA TTCGCTCCGT GGGCGTGCGT
CAGGATACCG GGGCGTATCA CATCATTCCT TGGTCTTCGA TAACCACCTT TGCTAACTTC
GTCCGCGGCA TTGGTTCGGT GGTGGCAAAC TACGATGTTG ATCGCCATGA AGATGCTGAT
AAAGCCAATC AGGCACTGAA AGATGCGGTA GCGGAATTGA TGGAAAACGA AGAAATTCGC
GGGCTGGTTA TTGGTGAACC AAACTTTGCC GGGATTGTCG GCTTAAGCAA TACCGCGTTT
ACACTGCGTG TTTCGTTCAC CACGCTGCCA CTCAAACAGT GGACGGTCCG CTTTGCCCTC
GACAGCCAGG TGAAAAAGCA TTTCGACCTG GCAGGTGTTC GCGCGCCAGT GCAGACTTAT
CAGGTGCTGC CTGCTCCGGG CGCGACCCCG GCTGAACCGC TGCCGCCGGG GGAGCCAACG
CTTTAA
 
Protein sequence
MRWILFILFC LLGAPAHAVS IPGVTTTTTT DSTTEPAPEP DIEQKKAAYG ALADVLDNDT 
SRKELIDQLR TVAATPPAEP VPKIVPPTLV EEQTVLQKVT EVSRHYGEAL SARFGQLYRN
ITGSPHKPFN PQTFSNALTH FSMLAVLVFG FYWLIRLCAL PLYRKMGQWA RQKNRERSNW
LQLPAMIIGA FIIDLLLLAL TLFVGQVLSD NLNAGSRTIA FQQSLFLNAF ALIEFFKAVL
RLIFCPNVAE LRPFTIQDES ARYWSRRLSW LSSLIGYGLI VAVPIISNQV NVQIGALANV
IIMLCMTVWA LYLIFRNKKE ITQHLLNFAE HSLAFFSLFI RAFALVWHWL ASAYFIVLFF
FSLFDPGNSL KFMMGATVRS LAIIGIAAFV SGMFSRWLAK TITLSPHTQR NYPELQKRLN
GWLSAALKTA RILTVCVAVM LLLSAWGLFD FWNWLQNGAG QKTVDILIRI ALILFFSAVG
WTVLASLIEN RLASDIHGRP LPSARTRTLL TLFRNALAVI ISTITIMIVL SEIGVNIAPL
LAGAGALGLA ISFGSQTLVK DIITGVFIQF ENGMNTGDLV TIGPLTGTVE RMSIRSVGVR
QDTGAYHIIP WSSITTFANF VRGIGSVVAN YDVDRHEDAD KANQALKDAV AELMENEEIR
GLVIGEPNFA GIVGLSNTAF TLRVSFTTLP LKQWTVRFAL DSQVKKHFDL AGVRAPVQTY
QVLPAPGATP AEPLPPGEPT L