Gene EcE24377A_0842 details

Gene Information

• Locus tag: EcE24377A_0842
• Symbol: uvrB
• ID: 5586905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 861703
• End bp: 863724
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640924552
• Product: excinuclease ABC subunit B
• Protein accession: YP_001461967
• Protein GI: 157155274
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000596238
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAC CGTTCAAACT GAATTCCGCT TTTAAACCTT CTGGCGATCA GCCAGAGGCG 
ATTCGACGTC TCGAAGAGGG GCTGGAAGAT GGCCTGGCGC ACCAGACGTT ACTTGGCGTG 
ACTGGCTCCG GGAAAACATT CACCATTGCC AATGTCATTG CTGACCTTCA GCGCCCAACC 
ATGGTACTTG CGCCCAACAA AACGCTGGCG GCCCAGCTGT ATGGCGAAAT GAAAGAGTTC 
TTCCCGGAAA ACGCGGTGGA ATATTTCGTT TCCTACTACG ACTACTATCA GCCGGAAGCC 
TATGTACCGA GTTCCGACAC TTTCATTGAG AAAGATGCCT CGGTTAACGA ACATATTGAG 
CAGATGCGTT TGTCCGCCAC CAAAGCGATG CTGGAGCGGC GTGATGTGGT TGTGGTGGCG 
TCTGTTTCCG CGATTTATGG TCTGGGCGAT CCTGATTTAT ATCTCAAGAT GATGCTCCAT 
CTCACGGTCG GTATGATTAT CGATCAGCGC GCGATTCTGC GCCGACTGGC GGAGCTGCAA 
TACGCTCGTA ATGATCAAGC ATTCCAGCGT GGTACTTTCC GCGTTCGTGG CGAGGTGATT 
GATATCTTCC CGGCAGAATC GGATGACATT GCACTTCGCG TGGAACTGTT TGACGAGGAA 
GTGGAACGAT TGTCGTTATT TGACCCGCTG ACCGGGCAGA TTGTTTCCAC TATTCCACGT 
TTTACCATCT ACCCGAAAAC GCACTACGTC ACACCGCGCG AGCGCATCGT ACAGGCGATG 
GAGGAGATCA AAGAAGAGCT GGCCGCCAGA CGCAAAGTGC TGTTGGAAAA CAACAAACTG 
CTGGAAGAGC AGCGGCTGAC CCAGCGTACC CAGTTTGATC TGGAGATGAT GAACGAGCTG 
GGCTACTGTT CGGGGATTGA AAACTACTCG CGCTTCCTCT CCGGTCGTGG ACCGGGTGAG 
CCACCGCCGA CGCTGTTTGA TTACCTCCCT GCTGATGGGC TGCTGGTGGT CGATGAATCT 
CACGTCACCA TTCCACAAAT TGGCGGCATG TATCGCGGTG ACCGGGCGCG TAAAGAGACA 
CTGGTGGAGT ACGGCTTCCG CCTGCCATCA GCGCTGGATA ACCGTCCGCT TAAGTTTGAA 
GAGTTCGAAG CATTAGCGCC GCAAACCATC TATGTTTCGG CGACGCCGGG TAATTACGAG 
CTGGAAAAAT CCGGCGGCGA TGTGGTGGAT CAGGTGGTGC GTCCAACCGG ATTGCTTGAC 
CCGATTATCG AAGTGCGGCC GGTGGCGACA CAGGTTGATG ATCTTCTTTC GGAGATTCGT 
CAGCGAGCGG CAATTAACGA ACGCGTACTG GTCACCACAC TGACCAAGCG AATGGCGGAA 
GATCTTACCG AATATCTCGA AGAACACGGT GAGCGCGTGC GTTATCTTCA CTCAGATATC 
GACACCGTCG AGCGTATGGA GATTATCCGC GACTTGCGTC TGGGTGAGTT CGACGTATTG 
GTAGGGATCA ACTTACTGCG TGAAGGTCTG GATATGCCGG AAGTTTCGCT GGTGGCGATC 
CTCGACGCTG ACAAAGAAGG CTTCCTGCGT TCCGAACGTT CGTTGATCCA GACCATTGGT 
CGTGCGGCAC GTAACGTTAA CGGTAAAGCG ATTCTCTACG GCGATAAGAT CACCCCATCA 
ATGGCGAAAG CGATTGGCGA AACCGAACGT CGCCGCGAGA AACAGCAGAA GTACAACGAG 
GAACACGGCA TTACGCCGCA AGGCTTGAAC AAGAAAGTGG TCGATATCCT GGCGTTGGGG 
CAGAACATTG CTAAAACCAA AGCGAAGGGC AGAGGAAAAT CGCGACCGAT TGTTGAGCCG 
GATAATGTGC CGATGGATAT GTCGCCTAAA GCGTTGCAGC AGAAAATCCA TGAGCTGGAA 
GGGTTGATGA TGCAACACGC GCAGAATCTG GAGTTCGAAG AAGCGGCGCA AATTCGTGAC 
CAGTTGCATC AGCTGCGTGA GCTGTTTATC GCGGCATCGT AA 

 

Protein sequence

MSKPFKLNSA FKPSGDQPEA IRRLEEGLED GLAHQTLLGV TGSGKTFTIA NVIADLQRPT 
MVLAPNKTLA AQLYGEMKEF FPENAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE 
QMRLSATKAM LERRDVVVVA SVSAIYGLGD PDLYLKMMLH LTVGMIIDQR AILRRLAELQ 
YARNDQAFQR GTFRVRGEVI DIFPAESDDI ALRVELFDEE VERLSLFDPL TGQIVSTIPR 
FTIYPKTHYV TPRERIVQAM EEIKEELAAR RKVLLENNKL LEEQRLTQRT QFDLEMMNEL 
GYCSGIENYS RFLSGRGPGE PPPTLFDYLP ADGLLVVDES HVTIPQIGGM YRGDRARKET 
LVEYGFRLPS ALDNRPLKFE EFEALAPQTI YVSATPGNYE LEKSGGDVVD QVVRPTGLLD 
PIIEVRPVAT QVDDLLSEIR QRAAINERVL VTTLTKRMAE DLTEYLEEHG ERVRYLHSDI 
DTVERMEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG 
RAARNVNGKA ILYGDKITPS MAKAIGETER RREKQQKYNE EHGITPQGLN KKVVDILALG 
QNIAKTKAKG RGKSRPIVEP DNVPMDMSPK ALQQKIHELE GLMMQHAQNL EFEEAAQIRD 
QLHQLRELFI AAS