| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0745 |
|---|
| Symbol | |
|---|
| ID | 5586553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 772370 |
|---|
| End bp | 772936 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640924458 |
|---|
| Product | putative type 1 fimbrial protein |
|---|
| Protein accession | YP_001461878 |
|---|
| Protein GI | 157158772 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAG GACAAAAAAC ATTGGCCGCA CTGGCCGTAT CTCTGCTGTT CACAGCACCT
GTTTATGCGG CTGATGAAGG ATCCGGTGAA ATTCACTTTA AAGGTGAAGT TATTGAAGCA
CCGTGTGAAA TACATCAGGA TGATATTGAT AAAGAGGTTG AACTCGGTCA GGTGACCACC
AGCCACATTA ATCAGTCACA TCACAGCGAT GCCGTTGCTG TCGACCTGCG CTTAGTCAAC
TGTGATCTGG AAAACTCCAG CAACGGTTCC GGTGGCAAGA TTTCTAAAGT TGCAGTCACC
TTTGATAGCT CAGCGAAAAC CACCGGCGCA GATCCGATTC TCAACAACAC CAGCACGGGT
GAAGCCACCG GCGTCGGCGT ACGTTTAATG AATAAAGATC AAAGCAATAT CGTTTTAGGC
ACCGCTACTC CAGATATCGA CCTGGCTCCG ACCTCCAGCG AACAAACGCT GAATTTCTTT
GCCTGGATGG AACAAATTGA TCAGGCTACA CCTGTAACGC CAGGCGCAGT TACGGCGAAT
GCAACCTACG TGCTGGATTA TAAATAA
|
|---|
| Protein sequence | MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHQDDID KEVELGQVTT
SHINQSHHSD AVAVDLRLVN CDLENSSNGS GGKISKVAVT FDSSAKTTGA DPILNNTSTG
EATGVGVRLM NKDQSNIVLG TATPDIDLAP TSSEQTLNFF AWMEQIDQAT PVTPGAVTAN
ATYVLDYK
|
|---|
| |