| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0678 |
|---|
| Symbol | hscC |
|---|
| ID | 5586020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 704400 |
|---|
| End bp | 706070 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640924394 |
|---|
| Product | DnaK family protein HscC |
|---|
| Protein accession | YP_001461820 |
|---|
| Protein GI | 157157133 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG CAGAACTCGC CATTGGTATC GATCTCGGTA CTACCAATAG TTTAATTGCC
GTCTGGAAAG ACGGTGCCGC GCAATTAATT CCAAATAAGT TCGGTGAATA TTTAACACCA
TCCATAATTA GCATGGATGA AAATAATCAT ATTTTAGTCG GAAAACCGGC TGTATCACGG
CGTACTTCGC ATCCGGATAA AACGGCAGCG TTATTTAAAC GTGCAATGGG CAGTAATACC
AACTGGCGGT TAGGCAGCGA CACATTTAAC GCGCCAGAAC TGTCCTCTTT GGTATTACGC
TCATTAAAAG AAGATGCCGA AGAATTTCTG CAACGTCCGA TTAAAGATGT GGTGATCTCC
GTTCCGGCTT ATTTCAGCGA TGAACAACGC AAGCATACCC GTTTAGCAGC GGAGTTAGCC
GGGTTAAATG CGGTACGCTT AATTAATGAA CCCACAGCAG CTGCGATGGC GTATGGCCTG
CATACCCAAC AAAATACCCG TTCGCTGGTG TTTGATCTCG GTGGCGGCAC GTTTGACGTT
ACGGTGCTTG AGTACGCCAC GCCGGTGATT GAAGTTCACG CCTCCGCTGG CGACAACTTC
CTCGGTGGCG AAGATTTTAC CCATATGTTG GTCGATGACG TTTTAAAGCG CGCGGATGTC
ACCAGGACCA CGCTTAACGA GAGTGAACTG GCAGCCTTGT ATGCCTGTGT GGAAGCGGCA
AAATGTAGCA ATCAATCGCC ATTACACATT CGCTGGCAGT ACCAGGATGA AGCACGGGAA
TGCGAATTTT ATGAGAATGA ACTGGAAGAT TTGTGGTTGC CGCTGCTCAA TCGCTTGCGA
GTGCCGATTG AACAGGCGTT GCGCGATGCG CGTCTGAAGC CAAGTCAAAT CGACAGTCTG
GTACTGGTTG GCGGCGCGTC ACAAATGCCG CTGGTGCAGC GAATCGCCGT GCGTCTGTTT
GGCAAATTAC CGTATCAAAG TTACGACCCG AGCACCATTG TCGCGCTGGG CGCAGCAATC
CAGGCCGCCT GCCGCTTACG CAGTGAAGAT ATTGAAGAGG TGATCCTCAC TGATATTTGC
CCTTACTCGT TGGGCGTTGA AGTTAACCGC CAGGGCATTT CCGGCATTTT CTCGCCAATT
ATTGAACGAA ACACCACAGT ACCGGTGTCG CGTGTAGAAA CTTACTCAAC CATGCACCCG
GAACAGGATT CTATTACGGT TAACGTCTAT CAGGGAGAAA ACCACAAAGT TAAAAATAAC
ATTCTGGTTG AATCCTTCGA TGTGCCGTTG AAGAAAACCG GGGCTTATCA GTCGATTGAT
ATTCGCTTTA GTTATGATAT CAACGGCTTG CTTGAAGTTG ACGTGCTTCT GGAAGATGGC
AGCGTTAAGT CCAGAGTCAT TAATCATAGC CCGGTAACAT TGAGCGCGCA GCAGATTGAA
GAGAGTCGGA CGCGGTTATC CGCATTGAAA ATTTATCCGC GCGATATGCT CATCAACCGC
ACCTTTAAGG CCAAACTGGA AGAGTTGTGG GCGCGGGCGC TGGGTGACGA GCGAGAAGAG
ATTGGCCGGG TGATCACCGA TTTTGATGCG GCGTTGCAGT CAAACGATAT GGCCCGCGTC
GATGAGGTCA GGCGGCGGGC GAGCGTTTAT TTAGCCATTG AGACCTCATA A
|
|---|
| Protein sequence | MDNAELAIGI DLGTTNSLIA VWKDGAAQLI PNKFGEYLTP SIISMDENNH ILVGKPAVSR
RTSHPDKTAA LFKRAMGSNT NWRLGSDTFN APELSSLVLR SLKEDAEEFL QRPIKDVVIS
VPAYFSDEQR KHTRLAAELA GLNAVRLINE PTAAAMAYGL HTQQNTRSLV FDLGGGTFDV
TVLEYATPVI EVHASAGDNF LGGEDFTHML VDDVLKRADV TRTTLNESEL AALYACVEAA
KCSNQSPLHI RWQYQDEARE CEFYENELED LWLPLLNRLR VPIEQALRDA RLKPSQIDSL
VLVGGASQMP LVQRIAVRLF GKLPYQSYDP STIVALGAAI QAACRLRSED IEEVILTDIC
PYSLGVEVNR QGISGIFSPI IERNTTVPVS RVETYSTMHP EQDSITVNVY QGENHKVKNN
ILVESFDVPL KKTGAYQSID IRFSYDINGL LEVDVLLEDG SVKSRVINHS PVTLSAQQIE
ESRTRLSALK IYPRDMLINR TFKAKLEELW ARALGDEREE IGRVITDFDA ALQSNDMARV
DEVRRRASVY LAIETS
|
|---|
| |