Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0648 |
Symbol | cspE |
ID | 5587980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 679965 |
End bp | 680174 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640924364 |
Product | cold shock protein CspE |
Protein accession | YP_001461790 |
Protein GI | 157157595 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00594526 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAA CGTTAAGTGG TTTAATGAGT CCAAAGGATT CGGTTTCATT ACTCCGGAAG ACGGCAGCAA AGACGTGTTC GTACACTTCT CTGCAATCCA GACTAATGGT TTTAAAACTC TTGCTGAAGG TCAGCGCGTA GAGTTCGAAA TCACTAACGG TGCCAAAGGC CCTTCTGCTG CAAACGTAAT CGCTCTGTAA
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Protein sequence | MSKIKGNVKW FNESKGFGFI TPEDGSKDVF VHFSAIQTNG FKTLAEGQRV EFEITNGAKG PSAANVIAL
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