| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0637 |
|---|
| Symbol | citF |
|---|
| ID | 5587439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 670712 |
|---|
| End bp | 672244 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640924354 |
|---|
| Product | citrate lyase alpha chain |
|---|
| Protein accession | YP_001461780 |
|---|
| Protein GI | 157156690 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3051] Citrate lyase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.559114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA AAATTGAACA ATCTCAACGA CAAGAACGGG TAGCGGCCTG GAATCGTCGC
GCTGAATGCG ATCTTGCCGC TTTCCAGAAC TCGCCAAAGC AAACCTACCA GGCTGAAAAA
GCGCGCGATC GCAAACTGTG CGCCAACCTG GAAGAAGCGA TTCGTCGCTC TGGTTTACAG
GACGGCATGA CGGTTTCCTT CCATCACGCT TTCCGTGGCG GTGACCTGAC CGTCAATATG
GTGATGGACG TCATCGCGAA GATGGGCTTT AAAAACCTGA CCCTGGCGTC CAGCTCCCTG
AGTGATTGCC ATGCGCCGCT GGTAGAACAC ATTCGCCAGG GCGTGGTTAC CCGCATTTAT
ACCTCTGGCC TACGCGGTCC ACTGGCGGAA GAAATCTCCC GCGGTCTGCT GGCGGAACCG
GTGCAAATCC ACTCTCACGG CGGTCGTGTG CATCTGGTAC AGAGCGGCGA ACTGAATATC
GATGTGGCTT TCCTCGGCGT CCCGTCCTGT GATGAATTCG GTAATGCCAA CGGCTACACC
GGTAAAGCCT GCTGCGGCTC CCTCGGCTAT GCAATGGTTG ATGCCGACAA CGCAAAACAG
GTTGTGATGC TTACCGAAGA ACTGCTGCCT TATCCGCATA ATCCGGCAAG CATTGAGCAA
GATCAGGTTG ATTTAATCGT CAAAGTTGAT CGCGTTGGCG ATGCTGCAAA AATCGGCGCT
GGTGCTACCC GTATGACCAC TAACCCGCGC GAACTGCTTA TTGCCCGTAG CGCTGCGGAT
GTGATTGTCA ACTCAGGCTA CTTCAAAGAA GGTTTCTCCA TGCAAACCGG CACCGGTGGC
GCATCGCTGG CGGTAACCCG TTTCCTGGAA GACAAAATGC GTAGCCGCGA TATTCGCGCC
GACTTCGCCC TCGGTGGTAT TACCGCGACG ATGGTTGATC TGCACGAAAA AGGTCTGATC
CGCAAACTGC TGGATGTACA GAGCTTTGAC AGCCACGCTG CGCAATCGCT GGCCCGTAAC
CCCAATCACA TCGAAATCAG CGCCAACCAG TACGCTAACT GGGGTTCGAA AGGCGCATCG
GTTGATCGTC TCGACGTGGT GGTACTGAGC GCGCTGGAAA TTGACACCCA GTTCAACGTT
AACGTGCTGA CCGGCTCTGA CGGCGTACTG CGTGGTGCTT CCGGTGGTCA CTGCGATACC
GCGATTGCCT CTGCGCTTTC CATCATCGTC GCGCCGCTGG TACGCGGTCG TATTCCGACT
CTGGTGGATA ACGTGCTGAC CTGCATCACC CCGGGCTCCA GTGTCGATAT TCTGGTCACA
GACCACGGTA TCGCAGTTAA CCCGGCACGT CCGGAGCTGG CAGAACGTCT GCAGGAAGCG
GGCATTAAAG TGGTTTCCAT TGAGTGGCTG CGTGAACGTG CGCGTCTGCT GACCGGTGAA
CCACAGCCGA TTGAATTCAC CGACCGCGTC GTTGCCGTTG TGCGTTACCG CGATGGCTCG
GTGATCGATG TTGTACATCA GGTGAAGGAA TAA
|
|---|
| Protein sequence | MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ
DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY
TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT
GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA
GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA
DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS
VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT
LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE
PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE
|
|---|
| |