| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0573 |
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| Symbol | fimC |
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| ID | 5589312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 593881 |
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| End bp | 594573 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640924293 |
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| Product | chaperone protein FimC |
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| Protein accession | YP_001461720 |
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| Protein GI | 157157610 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0096123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGACTA AAATAAAGTT ATTGATGCTC ATTATATTTT ATTTAATCAT TTCGGCCAGC
GCCCATGCTG CCGGAGGGAT CGCATTAGGT GCCACGCGTA TTATTTATCC CGCTGATGCT
AAACAGACTG CGGTATGGAT TAGAAATAGC CATACCAATG AGCGCTTTCT GGTCAATTCG
TGGATTGAAA ACAGCAGCGG TGTAAAAGAA AAGTCATTCA TCATTACACC GCCACTGTTT
GTTAGTGAAC CCAAAAGCGA AAATACCTTG CGTATTATTT ACACCGGTCC ACCGCTGGCG
GCAGATCGTG AGTCTCTGTT CTGGATGAAT GTTAAGACGA TCCCTTCGGT AGATAAAAAT
GCATTGAACG GCAGGAATGT TTTGCAACTG GCGATTTTAT CGCGCATGAA ATTATTTCTC
CGTCCAATTC AATTACAAGA ATTACCCGCA GAAGCGCCGG ACACACTCAA GTTTTCGCGA
TCCGGTAACT ATATCAATGT TCATAATCCA TCACCTTTTT ATGTCACCCT CGTTAACCTG
CAAGTGGGCA GCCAAAAGTT GGGGAATGCT ATGGCGGCAC CCAGAGTTAG TTCACAAATT
CCCTTACCCT CAGGAGTGCA GGGAAAGCTG AAATTTCAGA CCGTTAATGA TTATGGTTCA
GTAACCCCGG TCAGAGAAGT GAACTTAAAC TAA
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| Protein sequence | MMTKIKLLML IIFYLIISAS AHAAGGIALG ATRIIYPADA KQTAVWIRNS HTNERFLVNS
WIENSSGVKE KSFIITPPLF VSEPKSENTL RIIYTGPPLA ADRESLFWMN VKTIPSVDKN
ALNGRNVLQL AILSRMKLFL RPIQLQELPA EAPDTLKFSR SGNYINVHNP SPFYVTLVNL
QVGSQKLGNA MAAPRVSSQI PLPSGVQGKL KFQTVNDYGS VTPVREVNLN
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