| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0452 |
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| Symbol | ispA |
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| ID | 5586364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 473077 |
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| End bp | 473976 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640924176 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_001461603 |
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| Protein GI | 157155867 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTC CGCAGCAACT CGAAGCCTGC GTTAAGCAGG CCAACCAGGC GCTGAGCCGT
TTTATCGCCC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAACCATGCA GTATGGCGCA
TTATTAGGTG GTAAGCGTCT GCGACCCTTC CTGGTTTATG CCACCGGTCA TATGTTTGGC
GTTAGCACAA ACACGCTGGA CGCACCCGCT GCCGCCGTAG AGTGTATCCA CGCTTACTCA
TTAATTCATG ATGATTTACC GGCGATGGAT GATGACGATC TGCGTCGCGG TTTGCCGACC
TGCCATGTGA AGTTTGGCGA AGCAAACGCG ATTCTCGCTG GCGACGCTTT ACAAACGCTG
GCGTTCTCGA TTCTAAGCGA TGCCAATATG CCGGAAGTGT CGGATCGCGA CAGAATTTCG
ATGATTTCTG AACTGGCGAG CGCCAGCGGT ATTGCCGGAA TGTGCGGTGG TCAGGCATTA
GATTTAGACG CGGAAGGCAA ACACGTACCT CTGGACGCGC TTGAGCGTAT TCATCGTCAT
AAAACCGGCG CATTGATTCG CGCCGCCGTT CGCCTTGGTG CATTAAGCGC CGGAGATAAA
GGGCGTCGTG CTCTGCCAGT ACTCGACAAG TACGCAGAGA GCATCGGCCT TGCCTTCCAG
GTTCAGGATG ACATCCTGGA TGTGGTAGGA GATACTGCAA CGTTGGGAAA ACGCCAGGGT
GCCGACCAGC AACTTGGTAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG
AAGAAAGCCC GGGATCTGAT CGACGATGCC CGTCAGTCGC TGAAACAACT GGCTGAACAA
TCACTCGATA CCTCGGCACT GGAAGCGCTA GCGGACTACA TCATCCAGCG TAATAAATAA
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| Protein sequence | MDFPQQLEAC VKQANQALSR FIAPLPFQNT PVVETMQYGA LLGGKRLRPF LVYATGHMFG
VSTNTLDAPA AAVECIHAYS LIHDDLPAMD DDDLRRGLPT CHVKFGEANA ILAGDALQTL
AFSILSDANM PEVSDRDRIS MISELASASG IAGMCGGQAL DLDAEGKHVP LDALERIHRH
KTGALIRAAV RLGALSAGDK GRRALPVLDK YAESIGLAFQ VQDDILDVVG DTATLGKRQG
ADQQLGKSTY PALLGLEQAR KKARDLIDDA RQSLKQLAEQ SLDTSALEAL ADYIIQRNK
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