| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0396 |
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| Symbol | |
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| ID | 5589161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 424630 |
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| End bp | 427398 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640924120 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001461547 |
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| Protein GI | 157157315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.381376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGGAG ATTCAGGGGG GCAGTCTAGC AACTATGTAA ACTATAGTGG TTTTGTCTAT
TACAACAACA CCAATGGTGA TTTCGATCAG TCCTTTAACG GCGATACCGT TAACGGGACA
ATCTCAACCT ATTATTTGAA CCATGATTAT GCAGACAGTA CTGCTAATCA GCTTGATATC
AGTAATTCAG TGATTCACGG TTCGATTACT TCTATGCTGC CTGGCGGTTA TTATGATCGT
TTTGATGCAG ATGGTAATAA TCTGGGTGGA TATGATTTTT ACACTGATGC GGTTGTTGAT
ACACACTGGC GTGATGGTGA TGTTTTCACT TTGAACATTG CTAACACTAC TATTGATGAT
GATTATGAAG CTCTTTACTT CACTGATTCT TATAAAGATG GTGATGTAAC CAAGCACACA
AATGAGACAT TTGATACAAG TGAAGGCGTT GCTGTTAATC TTGATGTAGA AAGTAACATC
AATATTTCCA ATAACTCCCG CGTTGCAGGT ATTGCATTAT CTCAAGGTAA TACTTACAAC
GAAACCTACA CTACCGAATC TCATACTTGG GATAACAATA TCTCTGTAAA AGATTCCACA
GTGACTTCGG GTTCAAATTA TATCCTGGAT AGCAATACTT ATGGCAAAAC TGGTCACTTT
GGCAATTCTG ATGAACCGAG TGATTATGCT GGCCCGGGTG ATGTTGCAAT GTCCTTTACT
GCTTCAGGTT CCGACTATGC GATGAAGAAC AATGTATTCC TCAGCAATTC AACGCTGATG
GGTGATGTTG CCTTTACCAG CACCTGGAAT AGTAATTTTG ATCCGAATGG TCATGATTCC
AACGGTGACG GGGTGAAAGA TACCAACGGG GGTTGGACTG ATGATAGCCT CAACGTTGAT
GAACTAAATC TCACTCTCGA TAACGGAAGC AAGTGGGTTG GTCAGGCAAT TTATAACGTT
GCTGAAACGT CAGCAATGTA TGATGTTGCT ACAAACAGCC TTACTCCTGA TGCAACATAT
GAAAACAATG ACTGGAAACG TGTTGTTGAT GACAAGGTCT TCCAGAGCGG TGTATTTAAC
GTAGCGTTGA ATAACGGTTC TGAATGGGAT ACTACAGGTC GTTCCATCGT TGATACCTTG
ACAGTTAATA ATGGTTCTCA GGTTAATGTT TCGGAATCTA AATTAACTTC AGATACTATC
GATTTAACTA ACGGTTCTTC GCTGAACATT GGTGAAGATG GCTACGTTGA TACCGATCAT
CTGACTATTA ACTCCTACAG TACTGTTGCG TTGACCGAAT CTACTGGGTG GGGGGCTGAT
TACAACCTGT ACGCCAATAC TATCACCGTA ACTAACGGTG GTGTATTGGA TGTGAACGTT
GATCAGTTCG ATACTGAAGC TTTCCGTACT GACAAACTGG AACTGACCAG CGGCAACATC
GCTGACCATA ACGGTAACGT AGTATCTGGT GTGTTCGATA TCCATAGCAG CGATTACGTT
CTGAACGCTG ATCTGGTGAA CGACCGTACG TGGGATACTT CCAAGTCTAA CTACGGTTAC
GGTATTGTTG CTATGAACTC TGACGGTCAC CTGACTATCA ATGGTAACGG CGACGTAGAC
AACGGTACTG AACTGGATAA CAGCTCTGTT GATAACGTTG TTGCTGCAAC CGGTAACTAC
AAAGTTCGTA TCGACAACGC AACTGGCGCT GGCGCTATCG CTGATTACAA AGATAAAGAA
ATTATCTACG TAAACGACGT CAACACCAAC GCGACCTTCT CTGCTGCTAA CAAAGCTGAC
CTGGGTGCAT ACACCTATCA GGCTGAACAG CGCGGTAACA CCGTTGTTCT GCAACAGATG
GAGCTGACCG ACTACGCTAA CATGGCGCTG AGCATCCCGT CTGCGAACAC CAATATCTGG
AACCTGGAAC AAGACACCGT TGGTACTCGT CTGACCAACT CTCGTCATGG CCTGGCTGAT
AACGGCGGCG CATGGGTAAG CTACTTCGGT GGTAACTTCA ACGGCGACAA CGGCACCATC
AACTATGATC AGGATGTTAA CGGCATCATG GTCGGTGTTG ATACCAAAAT TGACGGTAAC
AACGCTAAGT GGATCGTCGG TGCGGCTGCA GGCTTCGCTA AAGGTGACAT GAATGACCGT
TCTGGTCAGG TGGATCAAGA CAGCCAGACT GCCTACATCT ACTCTTCTGC TCACTTCGCG
AACAACGTCT TTGTTGATGG TAGCTTGAGT TACTCTCACT TCAACAACGA CCTGTCTGCA
ACCATGAGCA ACGGTACTTA CGTTGACGGT AGCACCAACT CCGACGCTTG GGGCTTCGGT
TTGAAAGCCG GTTACGACTT CAAACTGGGT GATGCTGGTT ACGTGACTCC TTACGGCAGC
ATTTCTGGTC TGTTCCAGTC TGGTGATGAC TACCAGCTGA GCAACGACAT GAAAGTTGAC
GGTCAGTCTT ACGACAGCAT GCGTTATGAA CTGGGTGTAG ATGCAGGTTA TACCTTCACC
TACAGCGAAG ACCAGGCTCT GACTCCGTAC TTCAAACTGG CTTACGTCTA CGACGACTCT
AACAACGATA ACGATGTGAA CGGTGATTCC ATCGATAACG GTACTGAAGG GTCTGCGGTA
CGTGTTGGTC TGGGTACTCA GTTCAGCTTC ACCAAGAACT TCAGCGCCTA TACCGATGCT
AACTACCTCG GTGGTGGTGA CGTAGATCAA GACTGGTCCG CGAACGTGGG TGTTAAATAT
ACCTGGTAA
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| Protein sequence | MSGDSGGQSS NYVNYSGFVY YNNTNGDFDQ SFNGDTVNGT ISTYYLNHDY ADSTANQLDI
SNSVIHGSIT SMLPGGYYDR FDADGNNLGG YDFYTDAVVD THWRDGDVFT LNIANTTIDD
DYEALYFTDS YKDGDVTKHT NETFDTSEGV AVNLDVESNI NISNNSRVAG IALSQGNTYN
ETYTTESHTW DNNISVKDST VTSGSNYILD SNTYGKTGHF GNSDEPSDYA GPGDVAMSFT
ASGSDYAMKN NVFLSNSTLM GDVAFTSTWN SNFDPNGHDS NGDGVKDTNG GWTDDSLNVD
ELNLTLDNGS KWVGQAIYNV AETSAMYDVA TNSLTPDATY ENNDWKRVVD DKVFQSGVFN
VALNNGSEWD TTGRSIVDTL TVNNGSQVNV SESKLTSDTI DLTNGSSLNI GEDGYVDTDH
LTINSYSTVA LTESTGWGAD YNLYANTITV TNGGVLDVNV DQFDTEAFRT DKLELTSGNI
ADHNGNVVSG VFDIHSSDYV LNADLVNDRT WDTSKSNYGY GIVAMNSDGH LTINGNGDVD
NGTELDNSSV DNVVAATGNY KVRIDNATGA GAIADYKDKE IIYVNDVNTN ATFSAANKAD
LGAYTYQAEQ RGNTVVLQQM ELTDYANMAL SIPSANTNIW NLEQDTVGTR LTNSRHGLAD
NGGAWVSYFG GNFNGDNGTI NYDQDVNGIM VGVDTKIDGN NAKWIVGAAA GFAKGDMNDR
SGQVDQDSQT AYIYSSAHFA NNVFVDGSLS YSHFNNDLSA TMSNGTYVDG STNSDAWGFG
LKAGYDFKLG DAGYVTPYGS ISGLFQSGDD YQLSNDMKVD GQSYDSMRYE LGVDAGYTFT
YSEDQALTPY FKLAYVYDDS NNDNDVNGDS IDNGTEGSAV RVGLGTQFSF TKNFSAYTDA
NYLGGGDVDQ DWSANVGVKY TW
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