| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0356 |
|---|
| Symbol | prpB |
|---|
| ID | 5586993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 384761 |
|---|
| End bp | 385651 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640924081 |
|---|
| Product | 2-methylisocitrate lyase |
|---|
| Protein accession | YP_001461508 |
|---|
| Protein GI | 157158231 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTAC ACTCTCCAGG TAAAGCGTTT CGCGCTGCAC TGACTAAAGA AAATCCATTG
CAGATTGTTG GCACCATCAA CGCTAATCAT GCGCTGTTGG CGCAGCGTGC CGGATATCAG
GCAATTTATC TCTCCGGCGG TGGCGTGGCG GCAGGGTCGC TGGGGCTGCC CGATCTCGGT
ATTTCTACCC TTGATGATGT GCTGACAGAT ATTCGCCGTA TCACCGACGT TTGTTCGCTG
CCACTGCTGG TGGATGCGGA TATCGGTTTT GGTTCTTCGG CCTTTAACGT GGCGCGTACG
GTGAAATCGA TGATTAAAGC CGGTGCGGCA GGATTGCATA TTGAAGATCA GGTTGGTGCG
AAACGCTGCG GTCATCGCCC GAACAAAGCG ATCGTCTCGA AAGAGGAGAT GGTGGATCGG
ATCCGCGCGG CGGTGGATGC GAAAACCGAT CCTGATTTTG TGATCATGGC GCGCACCGAT
GCGCTGGCGG TAGAGGGGCT GGATGCGGCG ATCGAGCGTG CACAGGCCTA TGTTGAAGCG
GGTGCCGAGA TGTTGTTCCC GGAGGCGATT ACCGAACTCG CCATGTACCG CCAGTTTGCC
GATGCGGTGC AGGTGCCGAT CCTCGCCAAC ATTACCGAAT TTGGCGCAAC ACCGCTGTTT
ACCACCGACG AATTACGCAG CGCCCATGTC GCAATGGCGC TGTACCCACT TTCAGCGTTC
CGCGCCATGA ACCGCGCCGC TGAGCATGTC TACAACGTCC TGCGCCAGGA AGGCACGCAG
AAAAGCGTCA TCGATACCAT GCAAACCCGC AACGAGCTGT ACGAAAGCAT CAACTACTAC
CAGTACGAAG CGAAGCTCGA CGACCTGTTT GCCCGTAGCC AGGTGAAATA A
|
|---|
| Protein sequence | MSLHSPGKAF RAALTKENPL QIVGTINANH ALLAQRAGYQ AIYLSGGGVA AGSLGLPDLG
ISTLDDVLTD IRRITDVCSL PLLVDADIGF GSSAFNVART VKSMIKAGAA GLHIEDQVGA
KRCGHRPNKA IVSKEEMVDR IRAAVDAKTD PDFVIMARTD ALAVEGLDAA IERAQAYVEA
GAEMLFPEAI TELAMYRQFA DAVQVPILAN ITEFGATPLF TTDELRSAHV AMALYPLSAF
RAMNRAAEHV YNVLRQEGTQ KSVIDTMQTR NELYESINYY QYEAKLDDLF ARSQVK
|
|---|
| |