Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0354 |
Symbol | prpR |
ID | 5587781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 382937 |
End bp | 384523 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640924079 |
Product | propionate catabolism operon regulatory protein PrpR |
Protein accession | YP_001461506 |
Protein GI | 157159324 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACATC CACCACGGCT TAATGACGAC AAACCGGTTA TCTGGACGGT ATCTGTAACG CGCCTGTTCG AGCTGTTTCG CGATATCAGC CTCGAGTTTG ATCACCTGGC GAACATTACC CCTATTCAGC TTGGCTTTGA AAAAGCAGTG ACCTACATCC GCAAGAAACT GGCAAACGAA CGCTGTGACG CCATCATCGC TGCTGGCTCT AACGGCGCGT ACCTGAAAAG CCGCCTGTCA GTGCCAGTTA TTTTGATTAA ACCGAGCGGC TACGATGTGT TACAGGCACT GGCAAAAGCC GGAAAACTCA CCTCTTCTAT CGGCGTTGTC ACCTATCAGG AAACCATTCC AGCGCTGGTG GCGTTTCAAA AAACCTTTAA TCTGCGCCTC GATCAACGTA GCTACATTAC CGAAGAAGAC GCCCGCGGGC AGATTAACGA GCTGAAAGCT AACGGCACTG AAGCGGTGGT CGGCGCGGGG CTGATTACCG ATCTGGCAGA AGAAGCCGGA ATGACCGGAA TTTTTATCTA TTCCGCCGCC ACCGTGCGCC AGGCGTTCAG CGATGCGCTG GATATGACGC GCATGTCGTT ACGCCATAAC ACTCACGATG CCACCCGCAA CGCCCTGAGA ACTCGTTACG TGCTGGGCGA TATGCTCGGT CAATCACCAC AGATGGAACA AGTACGGCAG ACTATTTTGC TGTATGCCCG CTCCAGTGCA GCGGTGTTGA TTGAGGGGGA AACGGGGACG GGCAAAGAGC TGGCGGCCCA GGCGATTCAT CGGGAATATT TTGCCCGCCA CGATGCGCGA CAGGGCAAAA AGTCGCATCC GTTTGTTGCC GTCAACTGCG GGGCGATAGC CGAATCGCTG CTGGAAGCGG AGCTGTTTGG CTATGAGGAA GGGGCGTTTA CCGGCTCGCG ACGCGGAGGT CGCGCCGGGC TGTTCGAAAT TGCCCACGGC GGTACGCTGT TTCTGGATGA GATTGGCGAA ATGCCGCTAC CTTTGCAGAC TCGCCTGTTA CGGGTGCTGG AAGAAAAAGA GGTCACCCGC GTCGGCGGGC ATCAGCCTGT TCCGGTAGAT GTACGGGTCA TTAGCGCCAC TCACTGCAAG CTGGAAGAAG ATATGCAGCA AGGACGTTTT CGCCGTGATC TGTTTTATCG GCTGAGTATT TTGCGTCTGC AATTGCCACC ACTGCGCGAG CGGGTGGCGG ATATTCTTCC GCTGGCGGAA AGCTTTTTGA AAGTGTCTCT GGCGGCGCTC TCCGCCCCGT TTTCTGCCGC ATTACGCCAG GGATTACAGG CAAGCGAAAC CGTGCTGGTG CACTACGACT GGCCAGGTAA TATTCGTGAA CTGCGCAATA TGATGGAGCG ACTGGCGCTA TTTTTAAGTG TGGAACCGAC GCCGGATTTA ACGCCGCAAT TTTTGCAGCT GCTACTGCCG GAACTGGCGC GCGAGTCGGC GAAAACTCCC GCTCCACGCT TACTGACACC ACAACAGGCA CTGGAGAAAT TTAATGGCGA TAAAACAGCA GCGGCGAATT ATTTAGGCAT CAGCCGGACG ACGTTCTGGC GGCGGCTGAA AAGCTGA
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Protein sequence | MAHPPRLNDD KPVIWTVSVT RLFELFRDIS LEFDHLANIT PIQLGFEKAV TYIRKKLANE RCDAIIAAGS NGAYLKSRLS VPVILIKPSG YDVLQALAKA GKLTSSIGVV TYQETIPALV AFQKTFNLRL DQRSYITEED ARGQINELKA NGTEAVVGAG LITDLAEEAG MTGIFIYSAA TVRQAFSDAL DMTRMSLRHN THDATRNALR TRYVLGDMLG QSPQMEQVRQ TILLYARSSA AVLIEGETGT GKELAAQAIH REYFARHDAR QGKKSHPFVA VNCGAIAESL LEAELFGYEE GAFTGSRRGG RAGLFEIAHG GTLFLDEIGE MPLPLQTRLL RVLEEKEVTR VGGHQPVPVD VRVISATHCK LEEDMQQGRF RRDLFYRLSI LRLQLPPLRE RVADILPLAE SFLKVSLAAL SAPFSAALRQ GLQASETVLV HYDWPGNIRE LRNMMERLAL FLSVEPTPDL TPQFLQLLLP ELARESAKTP APRLLTPQQA LEKFNGDKTA AANYLGISRT TFWRRLKS
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