Gene EcE24377A_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0352 
Symbol 
ID5586551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp381746 
End bp382393 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID640924077 
Productputative homoserine/threonine efflux protein 
Protein accessionYP_001461504 
Protein GI157159412 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA TCACGATGGA TCCTTTGCAC GCCGTTTACC TGACCGTAGG ACTGTTCGTG 
ATTACTTTTT TTAATCCGGG AGCCAATCTC TTTGTGGTAG TACAAACCAG CCTGGCTTCC
GGTCGACGCG CAGGGGTGCT GACCGGGCTG GGCGTGGCGC TGGGCGATGC ATTTTATTCC
GGGTTGGGTT TGTTTGGTCT TGCAACGCTA ATTACGCAGT GTGAGGAGAT TTTTTCGCTT
ATCAGAATCG TCGGCGGCGC TTATCTCTTA TGGTTTGCGT GGTGCAGCAT GCGCCGCCAG
TCAACACCGC AAATGAGCAC ACTACAACAA CCGATTAGCG CCCCCTGGTA TGTCTTTTTT
CGCCGCGGAT TAATTACCGA TCTCTCTAAC CCGCAAACCG TTTTATTTTT TATCAGTATT
TTCTCAGTAA CATTAAATGC CGAAACACCA ACATGGGCAC GTTTAATGGC CTGGGCGGGG
ATTGTGCTCG CATCAATTAT CTGGCGAGTT TTTCTTAGTC AGGCGTTTTC TTTGCCCGCT
GTGCGTCGTG CTTATGGGCG TATGCAACGC GTTGCCAGTC GGGTTATTGG TGCAATTATT
GGTGTATTCG CGCTACGCCT GATTTACGAA GGGGTGACGC AGCGGTGA
 
Protein sequence
MDEITMDPLH AVYLTVGLFV ITFFNPGANL FVVVQTSLAS GRRAGVLTGL GVALGDAFYS 
GLGLFGLATL ITQCEEIFSL IRIVGGAYLL WFAWCSMRRQ STPQMSTLQQ PISAPWYVFF
RRGLITDLSN PQTVLFFISI FSVTLNAETP TWARLMAWAG IVLASIIWRV FLSQAFSLPA
VRRAYGRMQR VASRVIGAII GVFALRLIYE GVTQR