| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0332 |
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| Symbol | |
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| ID | 5589482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 359500 |
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| End bp | 363483 |
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| Gene Length | 3984 bp |
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| Protein Length | 1327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640924057 |
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| Product | putative outer membrane autotransporter |
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| Protein accession | YP_001461485 |
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| Protein GI | 157158257 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TATATCGGCT AAAGTGGAAC AGGTCCCGTA ACTGTTGGAG CGTCTGCTCG
GAGCTGGGGA GCAGAGTAAA AGGAAAAAAG TCCCGGGCTG TTTTAATTAG CGCGATAAGT
TTATATTCAT CTCTGGTATT CGCCGATGAT GTCATCGTAA ACCAGGATAA AACTATTGAT
TTTGGCAAAG AGAACCAGAG CATCGATTAC CGTATTACGG TGACTGACAA TGCCAATCTG
GTAATCAATA CGACAGATAC TTCCCGTCCG CGTCTGACTC TCGCTTCTGG TGGTGGGTTG
GATATTACCG GAGGAAAGGT AACAATCAAT GGCCCGCTTA ACTTTTTGCT GAAAGGTACG
GGGTTCCTGA ATGTCTCCAA TGCTGGCAGC GAGTTATATG CTGATGATTT GTATGAGTCA
AACTCAGGCA TGAGACATGA TCAAGGCTAT TTTAATGTCT CCAATGGCGG CAAAATTCAT
GTTAAGGGCA CCAGTCGTCT GACTTATACG CAGGGGAATG TAAGCGGCGG AGGTAGTCAG
GTAAATGCAG GGACCTTCTT TATGGGCGTT TACGGCGGAT ATGGCGGTAA TCAGTTCCTG
TCGGTTAATA ACGGTGGTGA AGTTAATGCT CGTGAACATA TTAGCCTGGG TTATTACGAC
CAACGTTCTG ATACAACATT AGTCGTATCA GATGGAGGTA AAATATCCGC ACCGAAAATT
AGTTTAAGCA CCAACTCTGA GTTAGCGTTA GGTGCACAGG AAGGAAGTGC TGCGAAGGCT
GCAGGGATTA TTGATGCCGA AAAAATTGAG TTTGTGTGGG CAAAGACATC CGATAAGAAA
ATCACCTTAA ACCACACGGA TAAAAACGCG ACTATTTCCG CGGATATTGT CAGTGGCAGC
GAGGGCCTGG GCTATATCAA TGCGCTCAAT GGCACGACTT ACTTAACCGG TGATAACTCT
GCCTTTAGTG GTAAAGTCAA AATTGAGCAA AATGGCGCTT TAGGGATCAC CCAAAATATA
GGTACAGCAG AGATCAACAA CCGCGGGAAA TTACACCTGA AGGCTGACGA TAGCATGACC
TTTGCCAATA AGATTTCCGG CAATGGTACA ATAAGTATCG ACAGTGGGAC AGTGGCACTG
ACCGGCAATA ACTATGCATT CAGCGGATAT ATTGATGTCG CTTCTGGTGC TGTCGCGGTT
ATTTCTGAAG ACAAGAACAT CGGCCGTGCG GACCTGGATG TTGATGGCAA ACTGCAAATC
AATGCCAATA AAGATTGGGT ATTTGATAAC GATCTTCAAG GTAGAGGTAT TGTTGAAATA
AACATGGGGA ATCACGAATT CTCCTTCGAT GAGTTTGCTT ATACAGACTG GTTCCAGGGT
TCACTGGCGT TCCAGAACAC GACATTTAAC CTGGAAAAGA ATGCTGAGTT TCTGCAGAGA
GGCGGGATCA CTGCGGGTCA GGGAAGCCAG GTAACAGTGG GTAAGGGCGC TCACTCCATT
AGCACTTTGG GATTCTCCGG CGGAACCGTT GATTTTGGTG CCCTGACAGC AGGTGCACAG
ATGACAGAAG GGACGGTCAA CGTTAGTAAA ACGCTGGATT TGCGCGGCGA GGGTGTGATT
CAGGTTTCTG ACAGTGACGT TGTAAGCTCA GTATCTCGTG ATATTGACTC TGCGTTATCG
CTCACTGAAG TCGATGATGG TAACAGCACC ATTAAGTTGG TTGATGCGCA AGGTGCGGAA
GTTCTGGGCG ATGCGGGCAA TCTGCAATTG CAGGATAAAA ATGGGCAAAT CCTCTCCAGC
AGTGCCCAAC GTGATATTCA GCAGAATGGG CAAAAAGCGG CCGTCGGCAC TTACGACTAT
CGTCTGACGA GTGGGGTAAA CAATGACGGT CTGTATATCG GTTACGGCCT GACCCAGCTT
GATTTATACG CTACCGACAG CGATGCTCTG GTGCTGAGCT CTAACGGTAA AAGCGAGAAT
GCCGCCGATC TCAGCGCAAA GATTACCGGC AGTGGTGACC TGGCATTCAG CAGCCAGAAG
GGTCAGACCG TATCGCTTTC TAACAAAGAC AACGACTATA CCGGTGTTAC CGATCTGCGC
AGTGGGACGC TTTTGTTGAA TAACGATAAC GTGTTGGGTA ATACCCATGA ACTGCGTCTG
GCGGCAGAGA CTGAACTGGA TATGAATGGT CACAGCCAGA CCGTGGGCAC GCTCAATGGC
AGCGCCGATT CACTGCTGAG CTTAAATGGC GGCAGTCTGA CGGTTACCAA CGGGGGCACT
TCAACCGGTT CGTTAACGGG GAGCGGAGAG CTGAATATTC AGGGCGGCAC GCTGGACATC
GCGGGCGATA ACAGCAACCT GACGGCGAAT GTGAACATTG CTAATTCGGC TAATGTCCTG
GTAAGTCATG CGCAGGGATT GGGTAGCGCA AACGTTGAGA ACAACGGTAC CCTGGCGTTG
AATAATAGCG CTGAAAAAAG AGCGGCTGCG TCTGTGCATT ACACCCTGGG CGGCAATCTG
ACCAACAACG GTACGCTGAT GACTGGAATG TCAGGACAGC AAGCTGGCAA TGTGTTAGTG
GTGAAGGGGA ACTACCACGG TAATAACGGT CAACTAGTAA TGAATACGGT ACTGAATGGC
GATGACTCAG TAACCGATAA ATTGGTTGTC GAGGGCGATA CTAGCGGCAC GACTGCCGTT
ACGGTGAATA ACGCTGGCGG TACAGGTGCG AAAACCCTTA ACGGTATCGA ACTTATCCAT
GTAGACGGTA AGTCTGAGGG CGAATTTGTT CAGGCTGGTC GTATCGTTGC GGGGGCGTAT
GACTACACTC TCGCGCGTGG ACAAGGGGCA AATAGTGGTA ACTGGTATCT GACCAGCGGC
AGTGATTCTC CTGAACTGCA GCCGGAGCCA GACCCGATGC CGAATCCGGA GCCAAACCCG
AATCCAGAGC CGAACCCTAA CCCGACACCT ACGCCGGGTC CGGATCTGAA TGTGGATAAT
GACCTGCGAC CGGAGGCGGG TAGCTACATT GCGAACCTTG CAGCAGCGAA TACAATGTTC
ACCACGCGTC TGCATGAGCG TCTGGGTAAT ACGTACTATA CCGACATGGT GACGGGTGAG
CAGAAACAAA CCACTATGTG GATGCGCCAT GAAGGTGGTC ATAATAAATG GCGTGATGGC
AGCGGCCAGC TGAAAACCCA AAGCAATCGC TATGTTCTGC AACTGGGAGG CGATGTCGCG
CAGTGGAGCC AAAACGGCAG CGACAGCTGG CATGTTGGGG TCATGGCGGG ATATGGCAAC
AGCGACAGCA AAACCATTTC CTCGCGAACC GGTTATCGTG CAAAAGCGAG TGTGAACGGA
TATAGCACCG GCCTCTATGC CACCTGGTAT GCCGATGACG AGTCGCGTAA TGGCGCGTAT
CTCGACAGTT GGGCGCAGTA CAGCTGGTTT GATAACACAG TGAAAGGGGA TGACTTACAA
AGTGAATCCT ATAAATCAAA AGGATTTACC GCTTCACTGG AAGCTGGATA CAAACACAAA
TTAGCTGAAT TTAATGGCAG CCAGGGAACG CGTAATGAAT GGTATGTTCA GCCGCAAGCA
CAGGTTACCT GGATGGGAGT CAAAGCCGAT AAGCACCGCG AAAGCAACGG AACCCTCGTT
CATAGCAACG GTGATGGCAA TGTTCAAACC CGACTTGGCG TAAAAACCTG GCTGAAGAGC
CACCATAAAA TGGATGACGG TAAATCCCGC GAGTTCCAGC CGTTTGTAGA AGTGAACTGG
CTGCATAACA GTAAGGATTT CAGCACCAGT ATGGATGGCG TGTCCGTCAC TCAGGATGGA
GCCCGAAATA TTGCTGAGAT AAAAACCGGG GTGGAAGGAC AGCTAAATGC CAACCTGAAT
GTCTGGGGGA ATGTGGGCGT TCAGGTTGCC GATAGGGGAT ATAATGACAC CTCTGCAATG
GTTGGCATTA AGTGGCAATT CTGA
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| Protein sequence | MNKIYRLKWN RSRNCWSVCS ELGSRVKGKK SRAVLISAIS LYSSLVFADD VIVNQDKTID
FGKENQSIDY RITVTDNANL VINTTDTSRP RLTLASGGGL DITGGKVTIN GPLNFLLKGT
GFLNVSNAGS ELYADDLYES NSGMRHDQGY FNVSNGGKIH VKGTSRLTYT QGNVSGGGSQ
VNAGTFFMGV YGGYGGNQFL SVNNGGEVNA REHISLGYYD QRSDTTLVVS DGGKISAPKI
SLSTNSELAL GAQEGSAAKA AGIIDAEKIE FVWAKTSDKK ITLNHTDKNA TISADIVSGS
EGLGYINALN GTTYLTGDNS AFSGKVKIEQ NGALGITQNI GTAEINNRGK LHLKADDSMT
FANKISGNGT ISIDSGTVAL TGNNYAFSGY IDVASGAVAV ISEDKNIGRA DLDVDGKLQI
NANKDWVFDN DLQGRGIVEI NMGNHEFSFD EFAYTDWFQG SLAFQNTTFN LEKNAEFLQR
GGITAGQGSQ VTVGKGAHSI STLGFSGGTV DFGALTAGAQ MTEGTVNVSK TLDLRGEGVI
QVSDSDVVSS VSRDIDSALS LTEVDDGNST IKLVDAQGAE VLGDAGNLQL QDKNGQILSS
SAQRDIQQNG QKAAVGTYDY RLTSGVNNDG LYIGYGLTQL DLYATDSDAL VLSSNGKSEN
AADLSAKITG SGDLAFSSQK GQTVSLSNKD NDYTGVTDLR SGTLLLNNDN VLGNTHELRL
AAETELDMNG HSQTVGTLNG SADSLLSLNG GSLTVTNGGT STGSLTGSGE LNIQGGTLDI
AGDNSNLTAN VNIANSANVL VSHAQGLGSA NVENNGTLAL NNSAEKRAAA SVHYTLGGNL
TNNGTLMTGM SGQQAGNVLV VKGNYHGNNG QLVMNTVLNG DDSVTDKLVV EGDTSGTTAV
TVNNAGGTGA KTLNGIELIH VDGKSEGEFV QAGRIVAGAY DYTLARGQGA NSGNWYLTSG
SDSPELQPEP DPMPNPEPNP NPEPNPNPTP TPGPDLNVDN DLRPEAGSYI ANLAAANTMF
TTRLHERLGN TYYTDMVTGE QKQTTMWMRH EGGHNKWRDG SGQLKTQSNR YVLQLGGDVA
QWSQNGSDSW HVGVMAGYGN SDSKTISSRT GYRAKASVNG YSTGLYATWY ADDESRNGAY
LDSWAQYSWF DNTVKGDDLQ SESYKSKGFT ASLEAGYKHK LAEFNGSQGT RNEWYVQPQA
QVTWMGVKAD KHRESNGTLV HSNGDGNVQT RLGVKTWLKS HHKMDDGKSR EFQPFVEVNW
LHNSKDFSTS MDGVSVTQDG ARNIAEIKTG VEGQLNANLN VWGNVGVQVA DRGYNDTSAM
VGIKWQF
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