Gene EcE24377A_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0313 
Symbol 
ID5589454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp342246 
End bp343103 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content44% 
IMG OID640924038 
ProductAraC family transcriptional regulator 
Protein accessionYP_001461466 
Protein GI157156459 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGGC AGAAGATTCT ACAGCAGCTC CTGGAGTGGA TTGAGTGCAA TCTTGAGCAC 
CCTATTTCAA TCGAAGATAT CGCACAGAAA TCTGGCTACA GCAGACGCAA CATCCAGCTT
CTGTTCCGAA ATTTCATGCA TGTGCCTTTG GGAGAATACA TTCGCAAACG AAGGCTTTGC
CGTGCCGCTA TTCTTGTCCG GCTCACCGCG AAATCTATGC TTGATATTGC ACTCTCTTTG
CATTTTGATT CACAGCAGTC ATTCAGCCGC GAATTTAAAA AGTTATTCGG CTGCTCTCCC
CGTGAATACC GCCACCGTGA TTATTGGGAT CTCGCAAATA TCTTCCCTTC TTTTTTAATA
CGTCAACAGC AAAAGACGGA GTGTAGATTA GTCAATTTTC CTGAGACACC TATTTTTGGC
AACTCATTTA AATATGACAT TGAAGTGTCG AATAAATCAC CGGATGAAGA AGTCAAACTG
CGACGTCATC ATTTAGCCAG ATGTATGAAT AATTTTAAGA CGGATATCTA TTTCGTCTCC
ACGTTTGAAC CGTCAACAAA ATCGGTCGAT TTGCTCACGG TTGAAACTTT TGCCGGTACG
GTATGCAAAC AAACCGATTC AGAGATGCCG AAAGAGTGGA CAATTAACCG AGGACTGTAT
GCCTCTTTCC GCTATGAAGG TGAGTGGGAG CACTACCCTG AATGGGCGCG AAACCTCTAT
CTGATGGAAT TACCCGCCAG GGGGTTAGCC AGAGTGAACG GCAGTGATAT TGAGCGGTTT
TATTACAATG AAGATTTCGT AGAAAAGGAT AGCAATGATG TTGTTTGCGA AATTTTTATC
CCCGTTCGTC CGGTTTAG
 
Protein sequence
MIRQKILQQL LEWIECNLEH PISIEDIAQK SGYSRRNIQL LFRNFMHVPL GEYIRKRRLC 
RAAILVRLTA KSMLDIALSL HFDSQQSFSR EFKKLFGCSP REYRHRDYWD LANIFPSFLI
RQQQKTECRL VNFPETPIFG NSFKYDIEVS NKSPDEEVKL RRHHLARCMN NFKTDIYFVS
TFEPSTKSVD LLTVETFAGT VCKQTDSEMP KEWTINRGLY ASFRYEGEWE HYPEWARNLY
LMELPARGLA RVNGSDIERF YYNEDFVEKD SNDVVCEIFI PVRPV