Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0226 |
Symbol | |
ID | 5590609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 241926 |
End bp | 242408 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640923955 |
Product | hypothetical protein |
Protein accession | YP_001461385 |
Protein GI | 157155635 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA TAAGTTATTT ATCTTTGAGT GGAGAGACAC AAGGGCTAAT TTCAGCAGGT TGCTCAACGC TTGATTCTGT CGGAAACAAA GCGCAGCCAG AACATAAAGA TCAGATCATG GTTTATGCGT TAATGCATTC CATCTCAAGA AGTCAAAATG TCAATCATCA TGAATTAATT ATCACCAAAC CGGTTGATAA ATCCTCACCA TTGCTGGCAA AAGCACTTAG TGACAATGAA AAAATGGCAA TATGTGAATT TATACTCTAC CGAACCAGTA AAGCGGGTAT TTACCAGCCT TATTATAAAA TAAATCTGTC AAAAGCCCGA ATATCAAGTA TTGATTTTGT CACACCGCAT GCTGTCCTGG AAAAAGAACT GGAACCACAG GAGAGAATTG CCTTTATTTA TGAAGATATT TCCTGGGAGC ATACGTTAGC CGGTACGAAT GCAATGAGTA AATGGCAGGA TCGTGTACAG TAA
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Protein sequence | MANISYLSLS GETQGLISAG CSTLDSVGNK AQPEHKDQIM VYALMHSISR SQNVNHHELI ITKPVDKSSP LLAKALSDNE KMAICEFILY RTSKAGIYQP YYKINLSKAR ISSIDFVTPH AVLEKELEPQ ERIAFIYEDI SWEHTLAGTN AMSKWQDRVQ
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