| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0170 |
|---|
| Symbol | glnD |
|---|
| ID | 5589363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 186608 |
|---|
| End bp | 189280 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 890 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640923899 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_001461336 |
|---|
| Protein GI | 157157798 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.751876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCC TTCCAGAACA GTACGCAAAC ACCGCTCTCC CCACCCTGCC CGGTCAACCG
CAAAATCCAT GCGTCTGGCC CCGTGATGAA TTAACCGTCG GTGGGATAAA AGCCCATATC
GATACTTTCC AGCGTTGGCT GGGTGATGCC TTTGACAATG GGATCTCTGC AGAACAGTTG
ATTGAGGCGC GCACCGAGTT TATCGACCAG CTCCTGCAAC GATTATGGAT TGAAGCGGGA
TTCAGCCAGA TTGCCGACCT GGCATTGGTC GCCGGCGGTG GCTACGGTCG TGGCGAGCTG
CATCCACTTT CTGACATCGA TTTACTGATT TTAAGCCGTA AAAAGCTCCC GGACGATCAG
GCGCAAAAAG TGGGCGAGCT GTTAACGCTG CTCTGGGATG TAAAGCTGGA AGTCGGTCAT
AGTGTGCGCA CGCTTGAAGA GTGCATGCTG GAAGGGTTAT CGGATTTAAC CGTCGCCACC
AATTTAATCG AATCCCGCTT ATTAATTGGC GATGTTGCGC TCTTCCTCGA ACTGCAAAAA
CATATTTTTA GCGAAGGATT CTGGCCTTCC GACAAGTTCT ACGCGGCGAA AGTTGAAGAA
CAGAACCAGC GCCATCAGCG TTACCATGGC ACCAGCTACA ACCTTGAACC AGACATCAAA
AGTAGCCCTG GCGGCTTGCG CGATATTCAC ACTCTGCAAT GGGTGGCCCG CCGTCATTTT
GGCGCAACAT CGCTGGATGA AATGGTCGGG TTTGGCTTCT TAACCTCAGC GGAGCGGGCG
GAATTAAACG AATGTCTGCA TATACTGTGG CGTATTCGCT TTGCCCTGCA TCTGGTCGTC
AGCCGTTACG ATAATCGTCT GTTATTCGAT CGCCAACTTA GCGTCGCTCA GCGTCTGAAT
TACAGTGGTG AAGGCAACGA ACCGGTCGAG CGGATGATGA AGGATTACTT CCGCGTTACA
CGCCGCGTCA GTGAACTCAA CCAGATGCTG CTGCAACTGT TCGATGAAGC CATCCTCGCC
CTTCCCGCCG ACGAAAAACC ACGTCCAATC GACGATGAGT TTCAGCTACG CGGTACGCTA
ATCGACCTGC GTGATGAAAC ACTATTTATG CGCCAGCCGG AAGCCATCTT GCGTATGTTC
TACACCATGG TGCGCAACAG TGCGATCACC GGCATTTACT CCACCACGCT GCGCCAGTTA
CGCCATGCCC GTCGCCATCT GCAACAACCG CTGTGTAATA TTCCGGAAGC ACGAAAACTG
TTTTTGAGCA TTCTGCGTCA CCCCGGAGCG GTGCGGCGCG GGCTATTGCC AATGCATCGC
CATAGCGTGC TCGGCGCGTA TATGCCGCAA TGGTCGCATA TCGTCGGGCA GATGCAGTTT
GATCTGTTCC ACGCCTACAC GGTGGATGAA CATACTATCC GCGTGATGCT GAAACTGGAG
AGTTTTGCCA GTGAAGAAAC GCGCCAGCGC CATCCGTTGT GTGTGGACGT CTGGCCGCGC
CTGCCGTCAA CTGAGCTGAT TTTCATCGCC GCGCTGTTTC ACGATATCGC CAAAGGACGC
GGCGGCGACC ACTCCATTCT CGGTGCTCAG GATGTAGTGC ATTTTGCAGA ACTCCACGGG
CTGAACTCAC GCGAAACACA GCTGGTTGCC TGGCTGGTTC GCCAGCACTT GCTGATGTCG
GTGACAGCAC AACGCCGCGA TATTCAGGAC CCTGAAGTCA TCAAGCAGTT TGCCGAAGAA
GTTCAAACGG AAAATCGTCT GCGCTATCTG GTATGCCTGA CAGTGGCTGA CATTTGCGCC
ACCAACGAAA CGCTGTGGAA TAGCTGGAAG CAAAGTCTGT TGCGCGAACT CTATTTTGCC
ACCGAAAAGC AGCTACGACG CGGAATGCAA AACACGCCGG ATATGCGCGA ACGGGTTCGC
CATCACCAAC TCCAGGCACT GGCACTACTG CGCATGGATA ACATCGACGA AGAGGCGCTG
CACCAAATTT GGTCACGCTG TCGTGCTAAC TATTTTGTCC GCCATAGCCC AAATCAACTG
GCCTGGCATG CCCGCCATTT ATTACAGCAT GATTTAAGCA AACCGCTGGT ATTGCTTAGC
CCGCAGGCTA CGCGTGGAGG CACCGAGATT TTTATCTGGA GCCCGGACCG CCCCTATCTG
TTTGCCGCCG TCTGTGCCGA ATTAGACCGC CGCAATTTAA GTGTTCACGA CGCACAAATT
TTCACCACTC GCGACGGTAT GGCGATGGAT ACCTTTATCG TGCTGGAACC CGATGGCAGC
CCACTGTCCG CAGATCGTCA TGAGGTTATT CGGTTTGGTC TGGAGCAAGT ACTGACGCAA
AGTAGCTGGC AGCCACCGCA GCCCCGTCGC CAACCCGCCA AATTACGCCA TTTTACTGTT
GAAACCGAAG TAACGTTTTT GCCGACCCAT ACCGACCGCA AATCGTTCCT TGAGCTTATC
GCGCTCGACC AGCCAGGACT GCTGGCGAGA GTCGGGAAAA TTTTTGCCGA TCTGGGAATT
TCGCTTCATG GTGCCCGAAT TACAACCATT GGCGAGCGAG TAGAAGATTT ATTCATAATT
GCCACCGCTG ACCGGCGTGC ACTTAATAAC GAGTTGCAGC AGGAAGTGCA TCAGCGGTTG
ACAGAGGCCC TCAATCCAAA CGATAAAGGG TGA
|
|---|
| Protein sequence | MNTLPEQYAN TALPTLPGQP QNPCVWPRDE LTVGGIKAHI DTFQRWLGDA FDNGISAEQL
IEARTEFIDQ LLQRLWIEAG FSQIADLALV AGGGYGRGEL HPLSDIDLLI LSRKKLPDDQ
AQKVGELLTL LWDVKLEVGH SVRTLEECML EGLSDLTVAT NLIESRLLIG DVALFLELQK
HIFSEGFWPS DKFYAAKVEE QNQRHQRYHG TSYNLEPDIK SSPGGLRDIH TLQWVARRHF
GATSLDEMVG FGFLTSAERA ELNECLHILW RIRFALHLVV SRYDNRLLFD RQLSVAQRLN
YSGEGNEPVE RMMKDYFRVT RRVSELNQML LQLFDEAILA LPADEKPRPI DDEFQLRGTL
IDLRDETLFM RQPEAILRMF YTMVRNSAIT GIYSTTLRQL RHARRHLQQP LCNIPEARKL
FLSILRHPGA VRRGLLPMHR HSVLGAYMPQ WSHIVGQMQF DLFHAYTVDE HTIRVMLKLE
SFASEETRQR HPLCVDVWPR LPSTELIFIA ALFHDIAKGR GGDHSILGAQ DVVHFAELHG
LNSRETQLVA WLVRQHLLMS VTAQRRDIQD PEVIKQFAEE VQTENRLRYL VCLTVADICA
TNETLWNSWK QSLLRELYFA TEKQLRRGMQ NTPDMRERVR HHQLQALALL RMDNIDEEAL
HQIWSRCRAN YFVRHSPNQL AWHARHLLQH DLSKPLVLLS PQATRGGTEI FIWSPDRPYL
FAAVCAELDR RNLSVHDAQI FTTRDGMAMD TFIVLEPDGS PLSADRHEVI RFGLEQVLTQ
SSWQPPQPRR QPAKLRHFTV ETEVTFLPTH TDRKSFLELI ALDQPGLLAR VGKIFADLGI
SLHGARITTI GERVEDLFII ATADRRALNN ELQQEVHQRL TEALNPNDKG
|
|---|
| |