Gene EcE24377A_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0153 
SymbolmrcB 
ID5586941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp166196 
End bp168730 
Gene Length2535 bp 
Protein Length844 aa 
Translation table11 
GC content55% 
IMG OID640923882 
Productpenicillin-binding protein 1b 
Protein accessionYP_001461319 
Protein GI157158219 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02071] penicillin-binding protein 1B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.267501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGA ATGACCGCGA GCCAATTGGA CGCAAAGGGA AACCGACGCG TCCGGTCAAA 
CAAAAGGTAA GCCGTCGTCG TTACGAAGAT GACGATGATT ACGACGATTA TGATGACTAT
GAGGATGAAG AACCGATGCC GCGCAAAGGT AAGGGCAAAG GCAAAGGGCG TAAGCCTCGT
GGCAAACGCG GCTGGCTATG GCTACTGCTA AAACTGGCTA TCGTTTTTGC CGTGCTGATC
GCCATTTACG GCGTTTATCT CGATCAAAAA ATTCGTAGCC GTATTGATGG CAAGGTCTGG
CAACTGCCTG CGGCAGTTTA TGGCCGAATG GTCAATCTTG AGCCAGACAT GACCATCAGC
AAGAACGAGA TGGTGAAGCT GCTGGAGGCG ACCCAGTATC GTCAGGTGTC GAAAATGACC
CGTCCTGGCG AATTTACCGT GCAGGCCAAC AGCATTGAGA TGATTCGCCG TCCGTTTGAT
TTCCCGGACA GTAAAGAAGG ACAGGTGCGC GCGCGTCTGA CCTTTGATGG CGATCATCTG
GCGACGATCG TCAATATGGA GAACAACCGT CAGTTCGGTT TCTTCCGTCT TGATCCGCGT
CTGATCACCA TGATCTCTTC GCCAAACGGT GAGCAGCGTC TGTTTGTGCC GCGCAGTGGT
TTCCCGGATT TGCTGGTGGA TACTTTGCTG GCGACAGAAG ACCGTCATTT TTACGAGCAT
GATGGAATCA GTCTCTACTC AATCGGACGT GCGGTGCTGG CAAACCTGAC CGCCGGACGC
ACGGTACAGG GTGCGAGTAC GCTGACGCAA CAGCTGGTGA AAAACCTGTT CCTCTCCAGC
GAGCGTTCTT ACTGGCGTAA AGCGAACGAA GCTTACATGG CGCTGATCAT GGACGCGCGT
TACAGCAAAG ACCGTATTCT TGAGCTGTAT ATGAACGAGG TGTATCTCGG TCAGAGCGGC
GACAACGAAA TCCGCGGCTT CCCGCTGGCA AGCTTGTATT ACTTTGGTCG CCCGGTAGAA
GAGCTAAGCC TCGACCAGCA GGCGCTGTTA GTCGGTATGG TGAAAGGGGC GTCCATCTAC
AACCCGTGGC GTAACCCAAA ACTGGCGCTG GAGCGACGTA ATCTGGTGCT GCGTCTGCTG
CAACAGCAAC AGATTATTGA TCAAGAACTC TATGACATGT TGAGTGCACG TCCGCTGGGT
GTTCAGCCAC GCGGTGGGGT GATCTCTCCA CAGCCAGCCT TTATGCAACT GGTGCGTCAG
GAGCTGCAGG CGAAATTAGG CGATAAGGTA AAAGATCTCT CCGGCGTGAA GATCTTCACT
ACCTTTGACT CGGTGGCCCA GGACGCGGCA GAAAAAGCCG CCGTGGAAGG CATTCCGGCA
CTGAAGAAAC AGCGTAAGTT GAGCGATCTT GAAACTGCGA TTGTGGTCGT CGACCGCTTT
AGTGGTGAAG TTCGTGCGAT GGTCGGTGGT TCTGAGCCGC AGTTTGCGGG CTACAACCGT
GCGATGCAGG CGCGTCGTTC GATTGGTTCC CTTGCAAAAC CAGCGACTTA TCTGACTGCC
TTAAGCCAGC CGAAAATCTA TCGTCTGAAT ACGTGGATTG CGGATGCGCC AATCGCGCTG
CGTCAGCCGA ATGGCCAGGT CTGGTCACCG CAGAATGATG ACCGTCGTTA TAGCGAAAGC
GGCAGAGTGA TGCTGGTGGA TGCGTTGACC CGTTCGATGA ACGTGCCGAC GGTAAATCTG
GGGATGGCGC TGGGGCTGCC TGCGGTTACG GAGACCTGGA TCAAACTGGG CGTACCGAAA
GATCAGTTGC ATCCGGTTCC GGCGATGCTG CTGGGGGCGT TGAACTTAAC GCCAATCGAA
GTGGCGCAGG CGTTCCAGAC CATCGCCAGC GGCGGTAACC GTGCACCGCT TTCTGCACTG
CGTTCGGTAA TTGCGGAAGA TGGCAAGGTG CTGTATCAGA GCTTCCCGCA GGCGGAACGC
GCTGTTCCGG CGCAGGCGGC GTATCTGACA CTATGGACCA TGCAGCAGGT GGTACAACGC
GGTACGGGTC GTCAGCTTGG GGCGAAATAC CCGAACCTGC ATCTGGCAGG GAAAACAGGG
ACTACCAACA ATAACGTAGA TACCTGGTTT GCAGGCATTG ACGGCAGCAC GGTGACCATC
ACCTGGGTAG GCCGTGATAA CAACCAGCCG ACCAAACTGT ATGGAGCCAG CGGGGCAATG
TCGATTTATC AGCGTTATCT GGCTAACCAG ACGCCAACGC CGCTGAATCT TGTTCCGCCA
GAAGATATTG CAGATATGGG CGTGGACTAC GACGGCAACT TTGTTTGCAG CGGTGGCATG
CGTGTCTTGC CGGTCTGGAC CAGCGATCCG CAATCGCTGT GCCAGCAGAG CGAGATGCAG
CAGCAGCCGT CAGGCAATCC GTTTGATCAG TCTTCTCAGC CGCAGCAACA GCCGCAACAG
CAACCTGCTC AGCAAGAGCA GAAAGACAGC GACGGTGTAG CCGGTTGGAT CAAGGATATG
TTTGGTAGTA ATTAA
 
Protein sequence
MAGNDREPIG RKGKPTRPVK QKVSRRRYED DDDYDDYDDY EDEEPMPRKG KGKGKGRKPR 
GKRGWLWLLL KLAIVFAVLI AIYGVYLDQK IRSRIDGKVW QLPAAVYGRM VNLEPDMTIS
KNEMVKLLEA TQYRQVSKMT RPGEFTVQAN SIEMIRRPFD FPDSKEGQVR ARLTFDGDHL
ATIVNMENNR QFGFFRLDPR LITMISSPNG EQRLFVPRSG FPDLLVDTLL ATEDRHFYEH
DGISLYSIGR AVLANLTAGR TVQGASTLTQ QLVKNLFLSS ERSYWRKANE AYMALIMDAR
YSKDRILELY MNEVYLGQSG DNEIRGFPLA SLYYFGRPVE ELSLDQQALL VGMVKGASIY
NPWRNPKLAL ERRNLVLRLL QQQQIIDQEL YDMLSARPLG VQPRGGVISP QPAFMQLVRQ
ELQAKLGDKV KDLSGVKIFT TFDSVAQDAA EKAAVEGIPA LKKQRKLSDL ETAIVVVDRF
SGEVRAMVGG SEPQFAGYNR AMQARRSIGS LAKPATYLTA LSQPKIYRLN TWIADAPIAL
RQPNGQVWSP QNDDRRYSES GRVMLVDALT RSMNVPTVNL GMALGLPAVT ETWIKLGVPK
DQLHPVPAML LGALNLTPIE VAQAFQTIAS GGNRAPLSAL RSVIAEDGKV LYQSFPQAER
AVPAQAAYLT LWTMQQVVQR GTGRQLGAKY PNLHLAGKTG TTNNNVDTWF AGIDGSTVTI
TWVGRDNNQP TKLYGASGAM SIYQRYLANQ TPTPLNLVPP EDIADMGVDY DGNFVCSGGM
RVLPVWTSDP QSLCQQSEMQ QQPSGNPFDQ SSQPQQQPQQ QPAQQEQKDS DGVAGWIKDM
FGSN