| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0142 |
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| Symbol | |
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| ID | 5590283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 154285 |
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| End bp | 156885 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640923871 |
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| Product | putative outer membrane usher protein |
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| Protein accession | YP_001461308 |
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| Protein GI | 157155946 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0236514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTATAA AACCAACTAA AAATTATCAT AATCATCTGA CCCGTATCGC TACGTTTTGC
GCGCTGCTGT ATTGCAATAG TGCTTTCTGT GCTGAACTTG TTGAATATGA CCATACCTTC
CTGATGGGGC AGAATGCCTC AAATATTGAT CTCAGCCGGT ATAGTGAAGG TAACCCTGCT
ATACCGGGTA TGTACGACGT CAGTGTTTAT GTCAACGATC AACCTATTAT TAACCAAAGC
ATTACATTTA TTGAAATTGA AGGAAAAAAA AACGCACAAG CCTGTATCAC ACTTAAGAAT
TTATTGCAGT TTCATATAAA TTCTCCCGAT ATAAATAACG AAAAAGCCGT TCTGCTTGCC
AGGGATGAAA CACTCGGCAA TTGCCTTAAT TTGACGGAAA TTATCCCTCA GGCTTCTGTT
CGTTATGACG TTAACGAGCA ACGTCTGGAT ATAGACGTTC CTCAGGCATG GGTAATGAAA
AATTACCAAA ACTATGTTGA TCCATCGTTA TGGGAAAATG GCATTAATGC GGCCATGTTG
TCATACAACC TCAACGGATA TCATAGTGAA ACTCCTGGTC GAAGAAATGA CAGCATTTAT
GCTGCTTTTA ACGGTGGGAT GAATTTAGGT GCATGGCGAC TGCGTGCCTC AGGCAACTAC
AACTGGATGA CCGATTCTGG CAGTAATTAT GATTTTAAGA ATCGGTATAT ACAGCGTGAT
ATCGCCTCGC TGCGTTCTCA ACTCATTCTT GGTGAGTCTT ATACAACGGG CGAAACCTTT
GATTCTGTCA GTATCCGCGG CATTCGTTTA TACAGCGACA GCCGCATGTT GCCTCCGACA
TTAGCGAGTT TTGCGCCTAT CATTCATGGC GTTGCTAATA CCAACGCCAA AGTCACTATT
ACGCAAGGTG GCTATAAGAT TTATGAAACG ACTGTGCCGC CAGGCGCTTT CGTCATTGAT
GATCTGAGTC CGTCAGGTTA CGGCAGCGAT CTTATTGTTA CTGTCGAAGA ATCCGATGGC
TCAAAGCGGA CATTCTCGCA ACCTTTTTCA TCGGTCGTTC AAATGTTACG CCCTGGCGTT
GGACGTTGGG ATATTAGCGG CGGCCAGGTC TTAAAAGATG ATATTCAGGA TGAGCCTAAT
TTATTTCAGG CCAGCTACTA CTACGGTCTG AATAACTATC TAACGGGTTA TACTGGTATT
CAGATTACCG ATAATAACTA TACCGCTGGT TTGTTAGGTC TTGGTCTGAA TACTTCAGTC
GGTGCATTTT CTTTCGATGT GACTCACTCC AATGTTCGTA TACCGGATGA TAAAACATAT
CAGGGACAAA GTTATCGTGT TTCCTGGAAC AAGTTATTCG AAGAAACAAG TACTTCACTG
AATATCGCGG CCTATCGCTA TTCGACACAG AATTACCTTG GTCTTAATGA TGCACTAACT
CTAATTGATG AAGTGAAACA TCCCGAACAA GATCTTGAAC CGAAATCCAT GCGTAATTAC
TCGCGCATGA AAAATCAGGT TACGGTCAGT ATTAACCAAC CGCTAAAATT TGAGAAAAAA
GATTACGGTT CATTTTATCT TTCCGGAAGT TGGTCCGATT ACTGGGCTTC CGGACAAAAT
CGTAGCAATT ACTCTATTGG CTACAGTAAC AGTGCATCCT GGGGCAGCTA CAGTGTCAGT
GCCCAGCGTT CATGGAATGA AGACGGCGAC ACTGACGATA GCGTTTATCT CAGTTTCACC
ATTCCTATTG AAAAATTACT TGGCACTGAA CAACGGACTT CAGGTTTCCA GAGTATTGAT
ACTCAAATGA GCAGTGACTT TAAGGGTAAT AACCAACTCA ACGTCAGTAG CAGTGGCTAT
AGTGATAACG CTCGCGTCAG TTATAGCGTA AATACTGGCT ATACGATGAA TAAAGCCAGC
AAAGATTTGA GTTATGTTGG GGGTTATGCC AGCTATGAAT CACCGTGGGG AACCCTGGCA
GGTTCAGTTT CTGCAAATAG CGATAACAGT CGTCAAGTGT CTCTCAGCAC CGACGGTGGT
TTTGTATTGC ATAGCGGCGG CCTGACCTTC AGTAATGACA GTTTTAGCGA CTCCGATACA
CTGGCGGTAG TTCAGGCTCC AGGTGCTCAA GGAGCGCGAA TAAATTATGG CAACAGTACT
ATCGATCGAT GGGGTTATGG TGTCACCAGC GCTCTTTCTC CTTATCATGA AAACCGTATC
GCGCTGGATA TCAACGATCT TGAGAACGAT GTTGAATTAA AAAGTACCAG TGCAGTAGCT
GTACCGCGTC AGGGTTCAGT CGTCTTTGCT GATTTTGAAA CCGTGCAAGG GCAATCAGCC
ATTATGAACA TCACACGAAG TGATGGTAAA AATATTCCAT TTGCTGCAGA TATTTATGAT
GAGCAAGGCA ATGTCATTGG TAATGTTGGA CAGGGTGGAC AAGCATTTGT TCGTGGTATT
GAGCAGCAGG GAAATATCAG CATTAAATGT CTCGAAGAAA GTAAACCCGT AAGTTGTCTT
GCGCATTATC AACAAAGTTC AGAAGCAGAA AAAATAGCGC AATCTATTAT TCTGAATGGA
ATTCGGTGTC AGATTCAGTA A
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| Protein sequence | MTIKPTKNYH NHLTRIATFC ALLYCNSAFC AELVEYDHTF LMGQNASNID LSRYSEGNPA
IPGMYDVSVY VNDQPIINQS ITFIEIEGKK NAQACITLKN LLQFHINSPD INNEKAVLLA
RDETLGNCLN LTEIIPQASV RYDVNEQRLD IDVPQAWVMK NYQNYVDPSL WENGINAAML
SYNLNGYHSE TPGRRNDSIY AAFNGGMNLG AWRLRASGNY NWMTDSGSNY DFKNRYIQRD
IASLRSQLIL GESYTTGETF DSVSIRGIRL YSDSRMLPPT LASFAPIIHG VANTNAKVTI
TQGGYKIYET TVPPGAFVID DLSPSGYGSD LIVTVEESDG SKRTFSQPFS SVVQMLRPGV
GRWDISGGQV LKDDIQDEPN LFQASYYYGL NNYLTGYTGI QITDNNYTAG LLGLGLNTSV
GAFSFDVTHS NVRIPDDKTY QGQSYRVSWN KLFEETSTSL NIAAYRYSTQ NYLGLNDALT
LIDEVKHPEQ DLEPKSMRNY SRMKNQVTVS INQPLKFEKK DYGSFYLSGS WSDYWASGQN
RSNYSIGYSN SASWGSYSVS AQRSWNEDGD TDDSVYLSFT IPIEKLLGTE QRTSGFQSID
TQMSSDFKGN NQLNVSSSGY SDNARVSYSV NTGYTMNKAS KDLSYVGGYA SYESPWGTLA
GSVSANSDNS RQVSLSTDGG FVLHSGGLTF SNDSFSDSDT LAVVQAPGAQ GARINYGNST
IDRWGYGVTS ALSPYHENRI ALDINDLEND VELKSTSAVA VPRQGSVVFA DFETVQGQSA
IMNITRSDGK NIPFAADIYD EQGNVIGNVG QGGQAFVRGI EQQGNISIKC LEESKPVSCL
AHYQQSSEAE KIAQSIILNG IRCQIQ
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