Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0112 |
Symbol | ampD |
ID | 5586289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 120307 |
End bp | 120858 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923841 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_001461278 |
Protein GI | 157157834 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000223729 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTTAG AACAGGGGTG GCTGGTTGGC GCGCGCCGCG TTCCCTCACC ACATTACGAT TGCCGTCCGG ATGACGAAAC ACCCACCCTG CTGGTGGTGC ACAATATTAG CCTGCCGCCA GGCGAGTTTG GCGGTCCGTG GATCGACGCA TTATTCACTG GAACTATTGA TCCGCAGGCA CATCCTTTCT TTGCTGAAAT CGCCCATTTG CGCGTCTCCG CTCACTGTTT GATTCGCCGT GATGGTGAAA TAGTCCAGTA TGTTCCTTTC GATAAACGTG CATGGCATGC GGGAGTCTCT CAGTATCAGG GGCGCGAACG CTGCAATGAT TTTTCTATTG GGATTGAGCT TGAAGGCACC GATACGCTGG CGTATACCGA TGCGCAGTAT CAACAGCTTG CGGCGGTTAC GCGGGCACTG ATTGATTGCT ATCCGGATAT CGCTAAAAAC ATGACGGGCC ATTGTGATAT TGCGCCGGAT CGGAAAACCG ATCCCGGTCC TGCATTTGAT TGGGCACGGT TTCGTGTGCT GGTCAGCAAG GAGACAACAT GA
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Protein sequence | MLLEQGWLVG ARRVPSPHYD CRPDDETPTL LVVHNISLPP GEFGGPWIDA LFTGTIDPQA HPFFAEIAHL RVSAHCLIRR DGEIVQYVPF DKRAWHAGVS QYQGRERCND FSIGIELEGT DTLAYTDAQY QQLAAVTRAL IDCYPDIAKN MTGHCDIAPD RKTDPGPAFD WARFRVLVSK ETT
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