| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0030 |
|---|
| Symbol | rihC |
|---|
| ID | 5589098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 30488 |
|---|
| End bp | 31402 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640923761 |
|---|
| Product | ribonucleoside hydrolase RihC |
|---|
| Protein accession | YP_001461198 |
|---|
| Protein GI | 157156462 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.719928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAC CTATCTTCCT CGATACTGAC CCCGGCATTG ACGATGCCGT CGCCATTGCC
GCCGCGATTT TTGCACCCGA ACTCGACCTG CAACTGATGA CCACCGTCGC GGGTAATGTC
TCGGTTGAGA AAACCACCCG TAACGCCCTG CAACTGCTGC ATTTCTGGAA TGCGGAGATT
CCGCTCGCCC AGGGAGCCGC TGTGCCGCTG GTACGCGCAC CGCGTGATGC GGTATCTGTG
CACGGCGAAT CGGGAATGGC TGGCTACGAC TTTGTTGAGC ACAACCGAAA GCCGCTCGGG
ATACCAGCGT TTCTGGCGAT TCGGGATGCC CTGATGCGTG CACCAGAGCC CGTTACCCTG
GTGGCCATCG GCCCGTTAAC CAATATTGCG CTGTTACTTT CACAATGCCC GGAATGTAAA
CCGTATATTC GTCGTCTGGT GATCATGGGC GGTTCTGCTG GTCGCGGCAA CTGCACACCA
AACGCCGAGT TTAATATCGC TGCCGATCCA GAAGCGGCTG CCTGTGTCTT CCGTAGCGGC
ATCGAAATCG TCATGTGCGG TCTGGATGTC ACCAATCAGG CAATATTAAC CCCTGACTAT
CTCGCTACTT TGCCGGAGTT GAATCGCACC GGAAAAATGC TCCACGCCCT GTTTAGCCAC
TACCGTAGCG GCAGTATGCA AAGTGGACTG CGTATGCACG ATCTTTGCGC TATTGCCTGG
CTGGTGCGCC CGGAATTGTT CACTCTTAAA CCGTGTTTTG TGGCAGTGGA AACTCAGGGC
GAATTTACCT CAGGCACGAC GGTGGTTGAT ATCGACGGTT GCCTGGGCAA ACCAGCCAAT
GTAAAGGTGG CATTGGATCT GGATGTGAAA GGCTTCCAGC AGTGGGTGGC TGAGGTGCTG
GCTCTGGCGT CGTAA
|
|---|
| Protein sequence | MRLPIFLDTD PGIDDAVAIA AAIFAPELDL QLMTTVAGNV SVEKTTRNAL QLLHFWNAEI
PLAQGAAVPL VRAPRDAVSV HGESGMAGYD FVEHNRKPLG IPAFLAIRDA LMRAPEPVTL
VAIGPLTNIA LLLSQCPECK PYIRRLVIMG GSAGRGNCTP NAEFNIAADP EAAACVFRSG
IEIVMCGLDV TNQAILTPDY LATLPELNRT GKMLHALFSH YRSGSMQSGL RMHDLCAIAW
LVRPELFTLK PCFVAVETQG EFTSGTTVVD IDGCLGKPAN VKVALDLDVK GFQQWVAEVL
ALAS
|
|---|
| |