| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0029 |
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| Symbol | ispH |
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| ID | 5589185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 29472 |
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| End bp | 30422 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640923760 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001461197 |
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| Protein GI | 157155637 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.253464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCC TGTTGGCCAA CCCGCGTGGT TTTTGTGCCG GGGTAGACCG CGCTATCAGC
ATTGTTGAAA ACGCGCTGGC CATTTACGGC GCACCGATAT ATGTCCGTCA CGAAGTGGTA
CATAACCGCT ATGTGGTCGA TAGCTTGCGT GAGCGTGGGG CTATCTTTAT TGAGCAGATT
AGCGAAGTAC CGGACGGCGC GATCCTGATT TTCTCCGCAC ACGGTGTTTC TCAGGCGGTA
CGTAACGAAG CAAAAAGTCG CGATTTGACG GTATTTGACG CGACCTGTCC GCTGGTGACC
AAAGTGCATA TGGAAGTCGC CCGCGCCAGT CGCCGTGGCG AAGAATCTAT TCTCATCGGT
CACGCCGGGC ACCCGGAAGT GGAAGGGACA ATGGGCCAGT ACAGTAACCC GGAAGGGGGA
ATGTATCTGG TCGAATCGCC GGACGATGTG TGGAAACTGA CGGTCAAAAA CGAAGAGAAG
CTCTCCTTTA TGACCCAGAC CACGCTGTCG GTGGATGACA CGTCTGATGT GATCGACGCG
CTGCGTAAAC GCTTCCCGAA AATTGTCGGT CCGCGCAAAG ATGACATCTG CTACGCCACG
ACTAACCGTC AGGAAGCGGT ACGCGCCCTG GCAGAACAGG CGGAAGTTGT GTTGGTGGTC
GGTTCGAAAA ACTCCTCCAA CTCCAACCGT CTGGCGGAGC TGGCCCAGCG TATGGGCAAA
CGCGCGTTTT TGATTGACGA TGCGAAAGAT ATCCAGGAAG AGTGGGTGAA AGAGGTTAAA
TGCGTCGGCG TGACTGCGGG CGCATCGGCT CCGGATATTC TGGTGCAAAA TGTGGTGGCA
CGTTTGCAGC AGCTGGGCGG TGGTGAAGCC ATTCCGCTGG AAGGCCGTGA AGAAAACATT
GTTTTCGAAG TGCCGAAAGA GCTGCGTGTC GATATTCGTG AAGTCGATTA A
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| Protein sequence | MQILLANPRG FCAGVDRAIS IVENALAIYG APIYVRHEVV HNRYVVDSLR ERGAIFIEQI
SEVPDGAILI FSAHGVSQAV RNEAKSRDLT VFDATCPLVT KVHMEVARAS RRGEESILIG
HAGHPEVEGT MGQYSNPEGG MYLVESPDDV WKLTVKNEEK LSFMTQTTLS VDDTSDVIDA
LRKRFPKIVG PRKDDICYAT TNRQEAVRAL AEQAEVVLVV GSKNSSNSNR LAELAQRMGK
RAFLIDDAKD IQEEWVKEVK CVGVTAGASA PDILVQNVVA RLQQLGGGEA IPLEGREENI
VFEVPKELRV DIREVD
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