Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0019 |
Symbol | |
ID | 5588563 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 20560 |
End bp | 21567 |
Gene Length | 1008 bp |
Protein Length | |
Translation table | |
GC content | 40% |
IMG OID | 640745666 |
Product | |
Protein accession | |
Protein GI | |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000307086 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCTT TATCTAAAAA TCTGGGAAAT GTATCATTAA GTGCGCTTTG GCGGAATTAC TGGGGGCGAA GTGGAAATGC TAAAGATTAC CAACTCAGTT ACTCCAATAA CTGGCAACAC ATTAGTTATA CTTTCTCTGC CAGCCAATCT TATGATGAAA ATAATAAAGA AGAGGAGCGT TTTAATCTGT TTATCTCCAT TCCTTTCTAC TGGGGGGATG ATATTGCCAA AACACGTCAC CAAATTAACT TATCGAATTC GACCTCATTT TCCAAAGATG GCTATTCCTC CAACAATACT GGAATTACTG GCATAGCCGG TGAACATGAT CAGTTAAATT ATGGTATATA TGTTAATCAG CAACAACAAA ATAATGATAC CTCGCTTGGT ACGAATTTAA GCTGGAGAAC TCCCATCGCC ATAATAGATG GCAGCTATAG TCATTCTAAA AACGCCTGGC AAAGTGGTGG AAGTATTAGT AGTGGATTAG TTGTCTGGCC CGGTGGTATT AATATCACTA ACCAGTTATC CGATACATTT GCAATTCTGG ATGCGCCTGG GTTAGAAGGT GCACATATTA ATGGACAAAA ATACAATCGA ACAAACAGCA AAGGCCAGGT TGTTTACGAC CTGATAATAC CTCATCGTGA AAACCATCTG GTACTTGATA TAGCAAACAG TGAAAGTGAA ACAGAATTGC AGGGCAATCG TCAAATTATT GCACCTTACC GTGGAGCAGT TTCTTATGTG CAGTTTACAA CTGACCAACG TAAGCCCTGG TATATACAGG CACTGCGTCC CGATGGTTCG CCATTAACCT TTGGCTATGA CGTACTGGAT CTCCAGGAAA ATAATATTGG AGTCGTTGGC CAGGGTAGTC GCCTTTTTAT TCGCGTAGAT GAAATTCCCA CTGGAATAAA AGTTGCTCTC AATGATGAAC AGAACTTATT CTGTACTATT ACTTTTCAAC ACGTTATCGA TGAAAACAAA ACATATATAT GCCAGTAA
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Protein sequence | |
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