Gene EcE24377A_0016 details

Gene Information

• Locus tag: EcE24377A_0016
• Symbol: nhaA
• ID: 5589884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 17418
• End bp: 18584
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640923748
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_001461185
• Protein GI: 157155398
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.000467126
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACATC TGCATCGATT CTTTAGCAGT GATGCCTCGG GAGGCATTAT TCTTATCATT 
GCCGCTATCC TGGCGATGAT TATGGCCAAT AGCGGCGCAA CCAGTGGATG GTATCACGAC 
TTTCTGGAGA CGCCGGTTCA GCTCCGGGTT GGTTCACTCG AAATCAACAA AAACATGCTG 
TTATGGATAA ATGACGCGCT GATGGCGGTA TTTTTCCTGT TAGTCGGTCT GGAAGTTAAA 
CGTGAACTGA TGCAAGGATC GCTAGCCAGC TTACGCCAGG CCGCATTTCC AGTTATCGCC 
GCTATTGGTG GGATGATTGT TCCGGCATTA CTCTATCTGG CCTTTAACTA TGCCGATCCG 
ATTACCCGCG AAGGGTGGGC GATCCCGGCG GCTACTGACA TTGCCTTTGC ACTTGGTGTG 
CTGGCGCTGT TGGGAAGTCG TGTTCCGTTA GCGCTGAAGA TCTTTTTGAT GGCTCTGGCT 
ATTATCGACG ATCTTGGGGC CATCATTATC ATCGCATTGT TCTACACTAA TGACTTATCG 
ATGGCCTCTC TTGGTGTCGC GGCTGTAGCA ATTGCGGTAC TCGCGGTATT GAATCTGTGT 
GGTGTACGCC GCACGGGCGT CTATATTCTG GTTGGCGTAG TGTTGTGGAC TGCGGTGTTG 
AAATCGGGGG TTCACGCAAC CCTGGCGGGG GTAATTGTCG GCTTCTTTAT TCCTTTGAAA 
GAGAAGCATG GGCGTTCTCC AGCGAAGCGA CTGGAGCATG TGTTACACCC GTGGGTGGCG 
TATCTGATTT TGCCGCTGTT TGCATTTGCT AATGCTGGCG TTTCACTGCA AGGTGTCACG 
CTGGATGGCT TGACCTCCAT TCTGCCATTG GGGATCATCG CTGGCTTGCT GATTGGCAAA 
CCGCTGGGGA TTAGTCTGTT CTGCTGGTTG GCGCTGCGTT TGAAACTGGC GCATCTGCCT 
GAGGGAACGA CTTATCAGCA AATTATGGCG GTGGGGATCC TGTGCGGTAT CGGTTTTACT 
ATGTCTATCT TTATTGCCAG CCTGGCCTTT GGTAGCGTAG ATCCAGAACT GATTAACTGG 
GCGAAACTCG GTATCCTGGT CGGTTCTATC TCTTCGGCGG TAATTGGATA CAGCTGGTTA 
CGCGTTCGTT TGCGTCCATC AGTTTGA 

 

Protein sequence

MKHLHRFFSS DASGGIILII AAILAMIMAN SGATSGWYHD FLETPVQLRV GSLEINKNML 
LWINDALMAV FFLLVGLEVK RELMQGSLAS LRQAAFPVIA AIGGMIVPAL LYLAFNYADP 
ITREGWAIPA ATDIAFALGV LALLGSRVPL ALKIFLMALA IIDDLGAIII IALFYTNDLS 
MASLGVAAVA IAVLAVLNLC GVRRTGVYIL VGVVLWTAVL KSGVHATLAG VIVGFFIPLK 
EKHGRSPAKR LEHVLHPWVA YLILPLFAFA NAGVSLQGVT LDGLTSILPL GIIAGLLIGK 
PLGISLFCWL ALRLKLAHLP EGTTYQQIMA VGILCGIGFT MSIFIASLAF GSVDPELINW 
AKLGILVGSI SSAVIGYSWL RVRLRPSV