Gene EcHS_A4622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4622 
Symbol 
ID5592420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4626136 
End bp4626780 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content56% 
IMG OID640923715 
Producthypothetical protein 
Protein accessionYP_001461152 
Protein GI157163834 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA CAAAACTGAA ATTCCGGCTG CATCGGGCAG TGATTGTCCT GTTCTGTCTT 
GCCTTGTTAG TGGCACTGAT GCAGGGGGCG TCATGGTTTA GTCAAAACCA CCAGCGACAG
CGTAATCCAC AGCTGGAAGA ACTGGCCCGC ACCCTGGCGC GTCAGGTGAC GCTGAACGTT
GCACCGCTGA TGCGTACCGA CTCACCAGAT GAAAAACGCA TTCAGGCGAT CCTCGATCAG
TTAACGGATG AAAGCCGCAT CCTCGACGCG GGTGTGTATG ACGAACAAGG CGATCTTATC
GCCCGTTCAG GCGAAAGCGT CGAAGTGCGC GACCGGCTGG CGCTCGACGG TAAAAAAGCG
GGCGGCTATT TTAACCAGCA GATTGTCGAA CCAATTGCCG GGAAAAACGG ACCGCTCGGC
TATCTGCGCC TGACGCTCGA CACCCATACG CTCGCCACCG AAGCCCAACA GGTGGATAAC
ACCACTAACA TTTTACGCCT GATGTTGCTG CTTTCACTGG CAATCGGCGT AGTGCTGACC
CGCACGCTGC TACAGGGTAA ACGTACCCGC TGGCAGCAAT CGCCCTTCCT GTTAACCGCC
AGCAAACCGG TGCCGGAAGA GGAAGAAAGC GAGAAAAAAG AGTGA
 
Protein sequence
MARTKLKFRL HRAVIVLFCL ALLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNV 
APLMRTDSPD EKRIQAILDQ LTDESRILDA GVYDEQGDLI ARSGESVEVR DRLALDGKKA
GGYFNQQIVE PIAGKNGPLG YLRLTLDTHT LATEAQQVDN TTNILRLMLL LSLAIGVVLT
RTLLQGKRTR WQQSPFLLTA SKPVPEEEES EKKE