Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4579 |
Symbol | hpaI |
ID | 5592865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4588406 |
End bp | 4589194 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640923673 |
Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
Protein accession | YP_001461113 |
Protein GI | 157163795 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 88 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA GTTTTAAAGC GGCGCTGAAA GCAGGCCGTC CGCAGATTGG ATTATGGCTG GGGCTGAGCA GCAGCTACAG CGCGGAGTTA CTGGCCGGAG CAGGATTCGA CTGGTTGTTG ATCGACGGTG AGCACGCGCC GAATAACGTG CAAACCGTGC TCACCCAGCT ACAGGCGATT GCGCCCTACC CCAGCCAGCC GGTAGTACGT CCGTCGTGGA ACGATCCGGT GCAAATCAAA CAACTGCTGG ACGTCGGCAC ACAAACCTTA CTGGTGCCGA TGGTTCAAAA CGCTGACGAA GCCCGTGAAG CGGTACGCGC CACCCGTTAT CCCCCCGCCG GTATTCGCGG TGTGGGCAGT GCGCTGGCCC GCGCCTCGCG CTGGAATCGT ATTCCTGATT ACCTGCAAAA AGCCAACGAT CAAATGTGCG TGCTGGTGCA GATCGAAACG CGTGAGGCAA TGAAGAACTT ACCGCAGATT CTGGACGTGG AAGGAGTCGA CGGCGTGTTT ATCGGCCCGG CGGATCTGAG CGCCGATATG GGTTATGCCG GTAATCCACA GCACCCGGAA GTACAGGCCG CCATTGAGCA GGCGATCGTG CAGATCCGCG AAGCGGGCAA AGCACCGGGG ATCCTGATCG CCAATGAGCA ACTGGCAAAA CGCTATCTGG AACTGGGCGC GCTGTTTGTC GCCGTCGGCG TTGACACCAC CCTGCTCGCC CGCGCCGCTG AAGCGCTGGC AGCACGGTTT GGTGCGCAGG CTACCGCCGT GAAGCCCGGC GTGTATTAA
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Protein sequence | MENSFKAALK AGRPQIGLWL GLSSSYSAEL LAGAGFDWLL IDGEHAPNNV QTVLTQLQAI APYPSQPVVR PSWNDPVQIK QLLDVGTQTL LVPMVQNADE AREAVRATRY PPAGIRGVGS ALARASRWNR IPDYLQKAND QMCVLVQIET REAMKNLPQI LDVEGVDGVF IGPADLSADM GYAGNPQHPE VQAAIEQAIV QIREAGKAPG ILIANEQLAK RYLELGALFV AVGVDTTLLA RAAEALAARF GAQATAVKPG VY
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