Gene EcHS_A4579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4579 
SymbolhpaI 
ID5592865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4588406 
End bp4589194 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content60% 
IMG OID640923673 
Product2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
Protein accessionYP_001461113 
Protein GI157163795 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 


Plasmid Coverage information

Num covering plasmid clones88 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GTTTTAAAGC GGCGCTGAAA GCAGGCCGTC CGCAGATTGG ATTATGGCTG 
GGGCTGAGCA GCAGCTACAG CGCGGAGTTA CTGGCCGGAG CAGGATTCGA CTGGTTGTTG
ATCGACGGTG AGCACGCGCC GAATAACGTG CAAACCGTGC TCACCCAGCT ACAGGCGATT
GCGCCCTACC CCAGCCAGCC GGTAGTACGT CCGTCGTGGA ACGATCCGGT GCAAATCAAA
CAACTGCTGG ACGTCGGCAC ACAAACCTTA CTGGTGCCGA TGGTTCAAAA CGCTGACGAA
GCCCGTGAAG CGGTACGCGC CACCCGTTAT CCCCCCGCCG GTATTCGCGG TGTGGGCAGT
GCGCTGGCCC GCGCCTCGCG CTGGAATCGT ATTCCTGATT ACCTGCAAAA AGCCAACGAT
CAAATGTGCG TGCTGGTGCA GATCGAAACG CGTGAGGCAA TGAAGAACTT ACCGCAGATT
CTGGACGTGG AAGGAGTCGA CGGCGTGTTT ATCGGCCCGG CGGATCTGAG CGCCGATATG
GGTTATGCCG GTAATCCACA GCACCCGGAA GTACAGGCCG CCATTGAGCA GGCGATCGTG
CAGATCCGCG AAGCGGGCAA AGCACCGGGG ATCCTGATCG CCAATGAGCA ACTGGCAAAA
CGCTATCTGG AACTGGGCGC GCTGTTTGTC GCCGTCGGCG TTGACACCAC CCTGCTCGCC
CGCGCCGCTG AAGCGCTGGC AGCACGGTTT GGTGCGCAGG CTACCGCCGT GAAGCCCGGC
GTGTATTAA
 
Protein sequence
MENSFKAALK AGRPQIGLWL GLSSSYSAEL LAGAGFDWLL IDGEHAPNNV QTVLTQLQAI 
APYPSQPVVR PSWNDPVQIK QLLDVGTQTL LVPMVQNADE AREAVRATRY PPAGIRGVGS
ALARASRWNR IPDYLQKAND QMCVLVQIET REAMKNLPQI LDVEGVDGVF IGPADLSADM
GYAGNPQHPE VQAAIEQAIV QIREAGKAPG ILIANEQLAK RYLELGALFV AVGVDTTLLA
RAAEALAARF GAQATAVKPG VY