Gene EcHS_A4555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4555 
Symbol 
ID5594436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4562386 
End bp4563297 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content51% 
IMG OID640923651 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001461091 
Protein GI157163773 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACT GTGGTGCGAT TTTGCATAAT ATTGAAACCA AATGGCTTTA TGATTTTCTG 
ACCCTGGAAA AATGCCGCAA TTTTTCCCAG GCGGCAGTCA GTCGCAACGT CTCGCAACCG
GCATTCAGCC GCCGCATCCG TGCGCTGGAA CAGGCGATTG GTGTTGAATT GTTTAACCGC
CAAGTAACGC CGCTGCAACT CTCAGAACAA GGAAAAATCT TCCATTCGCA GATCCGCCAT
CTGTTGCAAC AGTTAGAGAG CAATCTGGCA GAGCTGCGTG GCGGCAGCGA TTACGCGCAA
CGAAAAATCA AGATAGCCGC TGCACACTCT CTTTCCCTCG GACTGTTACC GTCCATTATC
AGCCAGATGC CGCCGCTCTT TACCTGGGCA ATTGAAGCTA TTGATGTCGA TGAAGCGGTC
GATAAACTGC GTGAAGGGCA AAGTGACTGT ATTTTTTCCT TTCACGACGA AGATTTGCTG
GAAGCGCCGT TTGACCACAT TCGCTTATTT GAATCTCAAT TGTTCCCTGT CTGCGCCAGT
GACGAACACG GAGAAGCACT TTTTAACCTC GCGCAGCCAC ACTTTCCGTT ACTGAATTAC
AGCCGCAACT CCTACATGGG GCGATTGATT AATCGCACCC TGACGCGCCA CAGTGAGTTA
AGTTTCAGCA CCTTTTTTGT CTCTTCGATG AGCGAGCTTT TAAAGCAGGT TGCCCTCGAC
GGCTGTGGGA TTGCCTGGCT GCCGGAGTAC GCCATCCAAC AAGAAATTCG CAGCGGGAAG
CTCGTTGTAC TGAATCGGGA CGAACTGGTG ATCCCGATTC AGGCCTATGC ATACCGAATG
AATACCCGCA TGAATCCAGT TGCCGAACGC TTCTGGCGTG AACTGCGCGA GCTGGAGATT
GTGCTTAGCT GA
 
Protein sequence
MDDCGAILHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR 
QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII
SQMPPLFTWA IEAIDVDEAV DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS
DEHGEALFNL AQPHFPLLNY SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD
GCGIAWLPEY AIQQEIRSGK LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI
VLS