| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4544 |
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| Symbol | fimF |
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| ID | 5594249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 4552750 |
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| End bp | 4553280 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640923640 |
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| Product | fimbrial protein FimF |
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| Protein accession | YP_001461080 |
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| Protein GI | 157163762 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.596311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACA AACCTTTTTA TCTTCTGTGC GCTTTTTTGT GGCTGGCGGT GAGTCACGCT
TTGGCTGCGG ATAGCACGAT TACTATCCGC GGCTATGTCA GGGATAACGG CTGTAGTGTG
GCCGCTGAAT CAACCAATTT TACTGTTGAT CTGATGGAAA ACGCGGCGAA GCAATTTAAC
AACATTGGCG CGACGACTCC TGTTGTTCCA TTTCGTATTT TGCTGTCACC CTGTGGTAAT
GCCGTTTCTG CCGTAAAAGT TGGGTTTACC GGCGTTGCAG ATAGCCACAA TGCCAATCTG
CTTGCACTTG AAAATACGGT GTCAGCGGCT TCGGGACTGG GAATACAGCT TCTGAATGAG
CAGCAAAATC AAATACCCCT TAATGCTCCA TCGTCCGCGC TTTCGTGGAC GACCCTGACG
CCGGGTAAAC CAAATACGCT GAATTTTTAC GCCCGGCTAA TGGCGACACA GGTGCCTGTC
ACTGCAGGGC ATATCAATGC CACGGCTACC TTCACTCTTG AATATCAGTA A
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| Protein sequence | MRNKPFYLLC AFLWLAVSHA LAADSTITIR GYVRDNGCSV AAESTNFTVD LMENAAKQFN
NIGATTPVVP FRILLSPCGN AVSAVKVGFT GVADSHNANL LALENTVSAA SGLGIQLLNE
QQNQIPLNAP SSALSWTTLT PGKPNTLNFY ARLMATQVPV TAGHINATAT FTLEYQ
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