Gene EcHS_A4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4539 
SymbolfimE 
ID5593504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp4547040 
End bp4547636 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content47% 
IMG OID640923635 
Producttyrosine recombinase 
Protein accessionYP_001461075 
Protein GI157163757 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00145575 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAC GTCGTTATCT TACCGGTAAA GAAGTTCAGG CCATGATGCA GGCGGTTTGT 
TACGGGGCAA CGGGAGCCAG AGATTATTGT CTTATTCTGT TGGCATATCG GCATGGGATG 
CGTATTAGTG AACTGCTTGA TCTGCATTAT CAGGACCTTG ACCTTAATGA AGGTAGAATA 
AATATTCGCC GACTGAAGAA CGGATTTTCT ACCGTTCACC CGTTACGTTT TGATGAGCGT 
GAAGCCGTGG AACGATGGAC CCAGGAACGT GCTAACTGGA AAGGCGCTGA CCGGACTGAC 
GCTATATTTA TTTCTCGCCG CGGGAGTCGG CTTTCTCGCC AGCAGGCCTA TCGCATTATT 
CGCGATGCCG GTATTGAAGC TGGAACCGTA ACGCAGACTC ATCCTCATAT GTTAAGGCAT 
GCTTGCGGTT ATGAACTGGC GGAGCGTGGT GCCGATACCC GTTTAATTCA GGATTATCTC 
GGGCATCGAA ATATTCGCCA TACTGTGCGT TATACCGCCA GTAATGCTGC TCGTTTTGCC 
GGATTATGGG AAAGAAATAA TCTCATAAAC GAAAAATTAA AAAGAGAAGA AGTTTAA
 
Protein sequence
MSKRRYLTGK EVQAMMQAVC YGATGARDYC LILLAYRHGM RISELLDLHY QDLDLNEGRI 
NIRRLKNGFS TVHPLRFDER EAVERWTQER ANWKGADRTD AIFISRRGSR LSRQQAYRII 
RDAGIEAGTV TQTHPHMLRH ACGYELAERG ADTRLIQDYL GHRNIRHTVR YTASNAARFA 
GLWERNNLIN EKLKREEV