Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4521 |
Symbol | idnT |
ID | 5593984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4527332 |
End bp | 4528651 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640923617 |
Product | Gnt-II system L-idonate transporter |
Protein accession | YP_001461058 |
Protein GI | 157163740 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.00247449 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATTAA TCATTATTGC GGCAGGCGTC GCGCTGCTTC TTATCCTGAT GATCGGCTTT AAAGTTAACG GCTTTATTGC CCTCGTTCTG GTAGCTGCCG TCGTCGGATT TGCCGAAGGG ATGGATGCAC AGGCCGTCCT GCACTCTATA CAAAATGGTA TCGGCAGCAC GCTCGGCGGG CTGGCAATGA TTCTCGGTTT CGGGGCCATG TTAGGCAAGC TGATTTCTGA TACGGGTGCG GCACAACGTA TCGCCACTAC GCTGATTGCT ACTTTTGGTA AAAAACGCGT GCAATGGGCG CTAGTGATCA CCGGTCTGGT TGTGGGCCTC GCCATGTTTT TTGAAGTGGG TTTTGTCCTG CTGTTGCCGT TGGTATTTAC CATCGTAGCA TCATCAGGAT TACCCCTGTT GTATGTTGGC GTACCAATGG TAGCAGCGCT CTCTGTAACC CACTGTTTTC TGCCGCCACA TCCAGGGCCT ACTGCCATCG CGACTATCTT TGAGGCTAAT CTCGGAACGA CTTTACTGTA TGGATTTATC ATTACCATTC CGACAGTTAT TGTCGCAGGA CCGCTGTTTT CTAAACTGCT AACTCGCTTT GAGAAAGCAC CACCGGAAGG CTTATTTAAT CCTCATCTGT TTAGCGAAGA GGAGATGCCC TCCTTCTGGA ACAGTATTTT CGCTGCCGTG ATCCCGGTCA TCCTGATGGC TATCGCCGCC GTTTGTGAAA TTACGTTACC GAAAACTAAC ACCGTGCGCC TCTTCTTTGA ATTTGTCGGT AACCCTGCCG TTGCGCTGTT TATTGCCATT GTTATTGCGA TTTTCACACT GGGCCGACGT AATGGACGCA CCATCGAGCA AATCATGGAT ATCATTGGGG ATTCTATAGG CGCTATCGCG ATGATTGTGT TTATTATCGC TGGCGGCGGC GCGTTTAAGC AGGTATTAGT AGATAGCGGT GTCGGGCACT ATATTTCACA CTTAATGACC GGAACTACGC TTTCGCCGTT ATTGATGTGC TGGACTGTTG CGGCGCTGTT GCGTATCGCT CTGGGCTCTG CCACCGTCGC GGCCATTACC ACCGCGGGTG TGGTGTTGCC GATTATCAAC GTTACCCATG CCGATCCCGC TTTAATGGTA CTGGCAACCG GTGCGGGCAG CGTGATCGCG TCACACGTAA ACGACCCTGG CTTCTGGCTA TTTAAAGGGT ATTTTAATCT GACGGTTGGT GAAACGTTGC GTACCTGGAC GGTGATGGAA ACCCTTATTT CTATTATGGG TTTGCTGGGC GTGTTAGCCA TTAACGCCGT ATTGCACTGA
|
Protein sequence | MPLIIIAAGV ALLLILMIGF KVNGFIALVL VAAVVGFAEG MDAQAVLHSI QNGIGSTLGG LAMILGFGAM LGKLISDTGA AQRIATTLIA TFGKKRVQWA LVITGLVVGL AMFFEVGFVL LLPLVFTIVA SSGLPLLYVG VPMVAALSVT HCFLPPHPGP TAIATIFEAN LGTTLLYGFI ITIPTVIVAG PLFSKLLTRF EKAPPEGLFN PHLFSEEEMP SFWNSIFAAV IPVILMAIAA VCEITLPKTN TVRLFFEFVG NPAVALFIAI VIAIFTLGRR NGRTIEQIMD IIGDSIGAIA MIVFIIAGGG AFKQVLVDSG VGHYISHLMT GTTLSPLLMC WTVAALLRIA LGSATVAAIT TAGVVLPIIN VTHADPALMV LATGAGSVIA SHVNDPGFWL FKGYFNLTVG ETLRTWTVME TLISIMGLLG VLAINAVLH
|
| |