Gene EcHS_A4518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4518 
Symbol 
ID5593276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4523477 
End bp4524559 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID640923614 
Productputative permease 
Protein accessionYP_001461055 
Protein GI157163737 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000136034 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTT TTGGCGTACT TGACCGCTAT ATCGGTAAAA CTATTTTCAC CACCATCATG 
ATGACGCTGT TCATGCTGGT GTCGCTGTCG GGCATTATCA AGTTTGTCGA TCAGCTGAAA
AAAGCCGGGC AGGGGAGTTA CGACGCGTTA GGCGCAGGAA TGTATACCTT GCTGAGCGTG
CCGAAAGATG TGCAAATCTT CTTCCCGATG GCAGCTCTGC TTGGGGCGTT GCTTGGTCTT
GGGATGCTGG CGCAGCGCAG CGAACTGGTG GTGATGCAGG CTTCTGGTTT CACCCGTATG
CAGGTTGCGC TGTCGGTGAT GAAAACCGCC ATTCCGCTAG TCTTGCTGAC GATGGCGATT
GGTGAATGGG TCGCGCCGCA GGGCGAGCAG ATGGCGCGTA ACTACCGTGC GCAGGCGATG
TACGGCGGCT CGTTGCTCTC TACCCAGCAA GGCTTATGGG CGAAAGATGG CAACAACTTC
GTCTACATTG AGCGGGTTAA AGGTGACGAA GAGTTAGGTG GCATCAGCAT TTATGCCTTT
AACGAAAATC GTCGTCTGCA ATCCGTACGC TATGCCGCTA CTGCGAAGTT TGACCCGGAA
CATAAAGTCT GGCGTCTGTC GCAGGTTGAT GAATCTGATC TGACCAATCC GAAACAGATC
ACCGGTTCGC AGACGGTGAG CGGCACCTGG AAAACCAACC TCACGCCAGA CAAACTGGGC
GTGGTGGCGC TGGACCCGGA TGCACTCTCA ATCAGCGGTT TGCACAACTA CGTGAAGTAT
CTGAAGTCGA GCGGTCAGGA CGCTGGACGT TATCAGCTCA ACATGTGGAG CAAAATCTTC
CAGCCGCTAT CCGTGGCGGT GATGATGCTG ATGGCGCTGT CGTTCATCTT TGGCCCACTG
CGTAGCGTAC CGATGGGCGT GCGTGTGGTC ACCGGTATCA GCTTCGGTTT TGTCTTCTAC
GTACTGGACC AGATCTTCGG CCCGTTGACG TTGGTTTATG GCATCCCGCC GATCATCGGC
GCACTGTTGC CAAGCGCCAG CTTCTTCTTA ATCAGCCTGT GGCTGTTAAT GAGAAAATCG
TAA
 
Protein sequence
MQPFGVLDRY IGKTIFTTIM MTLFMLVSLS GIIKFVDQLK KAGQGSYDAL GAGMYTLLSV 
PKDVQIFFPM AALLGALLGL GMLAQRSELV VMQASGFTRM QVALSVMKTA IPLVLLTMAI
GEWVAPQGEQ MARNYRAQAM YGGSLLSTQQ GLWAKDGNNF VYIERVKGDE ELGGISIYAF
NENRRLQSVR YAATAKFDPE HKVWRLSQVD ESDLTNPKQI TGSQTVSGTW KTNLTPDKLG
VVALDPDALS ISGLHNYVKY LKSSGQDAGR YQLNMWSKIF QPLSVAVMML MALSFIFGPL
RSVPMGVRVV TGISFGFVFY VLDQIFGPLT LVYGIPPIIG ALLPSASFFL ISLWLLMRKS