Gene EcHS_A4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4506 
Symbol 
ID5593620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp4510618 
End bp4511211 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID640923604 
ProductTetR family transcriptional regulator 
Protein accessionYP_001461045 
Protein GI157163727 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.165942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTA AAAAACAATC TCGCGTTCCA GGTCGTCCCA GACGTTTCGC TCCTGAGCAG 
GCAGTCTCTG CGGCAAAAGT GCTTTTTCAC CAAAAAGGTT TCGATGCTGT CAGTGTTGCT 
GAAGTTACTG ATTATCTTGG TATTAACCCC CCGAGCCTCT ACGCGGCTTT TGGCAGTAAG 
GCTGGGTTAT TTAGCCGTGT ACTCAATGAA TATGTCGGTA CGGAAGCTAT TCCGCTTGCC 
GATATTCTTC TTGATGATCG TCCGGTAGGC GAGTGCCTGG TTGAGGTATT AAAAGAAGCG 
GCGCGCAGAT ATAGCCAAAA CGGCGGCTGC GCTGGCTGTA TGGTTCTTGA AGGTATTCAT 
AGTCATGATC CACAAGCGCG TGATATTGCC GTTCAATATT ATCACGCCGC AGAAACGACC 
ATTTATGACT ATATCGCCAG GCGGCATCCA CAAAGCGCAC AATGTGTGAC TGATTTTATG 
AGTACCGTGA TGTCAGGGCT TTCTGCGAAG GCACGGGAGG GGCACTCCAT CGAACAACTC 
TGTGCAACAG CTGCACTGGC GGGGGAAGCG ATAAAAACTA TTCTCAAGGA GTGA
 
Protein sequence
MVTKKQSRVP GRPRRFAPEQ AVSAAKVLFH QKGFDAVSVA EVTDYLGINP PSLYAAFGSK 
AGLFSRVLNE YVGTEAIPLA DILLDDRPVG ECLVEVLKEA ARRYSQNGGC AGCMVLEGIH 
SHDPQARDIA VQYYHAAETT IYDYIARRHP QSAQCVTDFM STVMSGLSAK AREGHSIEQL 
CATAALAGEA IKTILKE