Gene EcHS_A4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4505 
Symbol 
ID5593619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4509834 
End bp4510547 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content55% 
IMG OID640923603 
Productoxidoreductase 
Protein accessionYP_001461044 
Protein GI157163726 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.406489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCTT TTACAGGTAA GACAGTTCTC ATCCTCGGTG GTAGCCGTGG AATCGGTGCC 
GCTATCGTAC GTCGTTTCGT CACCGATGGG GCCAATGTAC GATTCACCTA TGCGGGGTCG
AAAGATGCCG CTGAACGCCT GGCACAAGAG ACGGGAGCGA CAGCAGTATT CACAGATAGT
GCTGACAGAG ACGCTGTTAT TGATGTCGTT CGTAAGAGCG GCGCATTGGA TATCCTCGTG
GTAAATGCAG GTATTGGCGT CTTTGGCGAT GCCCTGGAAT TAAATGCCGA CGATATTGAT
CGCCTTTTCA AAATCAATAT TCATGCTCCT TACCATGCCT CCGTTGAAGC CGCCCGGCAG
ATGCCCGAAG GCGGGCGCAT CTTAATCATC GGCTCCGTGA ATGGCGATCG TATGCCTGTT
GCAGGCATGG CTGCTTATGC CGCCAGCAAA TCTGCCCTGC AAGGCATGGC GCGCGGGCTG
GCCCGTGATT TTGGACCGCG TGGGATCACC ATCAACGTCG TCCAGCCAGG GCCAATTGAT
ACCGACGCTA ATCCCGCCAA CGGGCCAATG CGCGATATGT TGCATGGTTT TATGGCTATC
AAAAGACATG GGCAACCGGA AGAGGTCGCT GGTATGGTCG CATGGTTAGC AGGGCCAGAA
GCCAGCTTTG TTACCGGCGC GATGCATACC ATTGATGGCG CGTTTGGCGC ATAA
 
Protein sequence
MGAFTGKTVL ILGGSRGIGA AIVRRFVTDG ANVRFTYAGS KDAAERLAQE TGATAVFTDS 
ADRDAVIDVV RKSGALDILV VNAGIGVFGD ALELNADDID RLFKINIHAP YHASVEAARQ
MPEGGRILII GSVNGDRMPV AGMAAYAASK SALQGMARGL ARDFGPRGIT INVVQPGPID
TDANPANGPM RDMLHGFMAI KRHGQPEEVA GMVAWLAGPE ASFVTGAMHT IDGAFGA