| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4504 |
|---|
| Symbol | |
|---|
| ID | 5593618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4509308 |
|---|
| End bp | 4509703 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640923602 |
|---|
| Product | endoribonuclease L-PSP family protein |
|---|
| Protein accession | YP_001461043 |
|---|
| Protein GI | 157163725 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.282438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAA GAACCGCTGT TTTCCCTGCT GGCCGACATT CACTGTATGC TGAACATCGT
TATTCTGCGG CTATTCGCTC CGGCGATTTG CTGTTTGTTT CCGGGCAAGT AGGAAGTCGA
GAGGACGGAA CACCAGAACC CGATTTTCAG CAACAAGTCA GACTGGCATT TGATAATTTG
CATGCGACCC TGGCTGCTGC GGGATGCACT TTTGACGATA TCATTGATGT TACGAGCTTT
CATACCGATC CAGAAAAACA ATTCGAAGAC ATCATGACGG TGAAAAATGA AATATTTAGC
GCCCCACCTT ATCCAAACTG GACGGCGGTG GGTGTTACAT GGCTGGCAGG CTTTGATTTT
GAAATTAAAG TGATAGCGCG CATCCCTGAG CAGTAA
|
|---|
| Protein sequence | MVERTAVFPA GRHSLYAEHR YSAAIRSGDL LFVSGQVGSR EDGTPEPDFQ QQVRLAFDNL
HATLAAAGCT FDDIIDVTSF HTDPEKQFED IMTVKNEIFS APPYPNWTAV GVTWLAGFDF
EIKVIARIPE Q
|
|---|
| |