Gene EcHS_A4483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4483 
Symbol 
ID5595161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4487766 
End bp4488791 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content58% 
IMG OID640923581 
Productputative sugar ABC transporter, permease protein 
Protein accessionYP_001461022 
Protein GI157163704 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGCCTC AATCTCTCCC GGACACTACG CCGCCGAAAA GGCGCTTTCG CTGGCCAACG 
GGAATGCCGC AGCTGGCGGC GCTATTGCTG GTGCTGCTGG TCGATAGCCT GGTAGCCCCG
CATTTCTGGC AGGTGGTGCT TCAGGATGGG CGTTTGTTCG GTAGCCCTAT CGACATTCTT
AACCGTGCAG CTCCCGTTGC GTTACTGGCG ATTGGTATGA CGCTGGTGAT CGCCACCGGT
GGGATTGATC TCTCCGTAGG GGCGGTGATG GCTATCGCCG GAGCCACAAC GGCTGCGATG
ACGGTCGCGG GATTCAGCCT GCCGATTGTT TTGTTAAGCG CCCTGGGCAC CGGCATCCTG
GCGGGATTGT GGAACGGCAT ACTGGTAGCG ATCCTCAAAA TTCAGCCGTT TGTCGCCACC
CTGATCCTGA TGGTCGCCGG GCGCGGCGTG GCGCAACTGA TCACCGCCGG GCAGATCGTC
ACGTTTAACT CGCCGGATCT CTCATGGTTT GGCAGCGGAT CGCTGTTGTT CCTGCCAACG
CCGGTCATTA TCGCGGTGCT GACGCTTCTC CTGTTCTGGC TGTTGACCCG CAAAACGGCG
CTGGGGATGT TTATCGAAGC CGTTGGTATC AACATTCGGG CGGCAAAAAA TGCCGGGGTA
AACACGCGGA TCATCGTCAT GCTCACCTAC GTGTTGAGCG GGCTGTGTGC GGCGATTGCG
GGCATTATCG TGGCGGCGGA TATTCGCGGT GCCGATGCCA ATAACGCCGG GTTATGGCTG
GAGCTGGACG CCATTCTTGC GGTGGTGATT GGCGGCGGAT CGCTGATGGG CGGGCGCTTT
AACCTGCTGC TCTCAGTCGT GGGGGCGCTG ATTATTCAGG GGATGAACAC CGGAATTTTA
CTTTCTGGCT TTCCGCCGGA GATGAACCAG GTCGTAAAAG CGGTGGTGGT GCTTTGTGTG
CTGATTGTTC AGTCGCAACG CTTTATCAGT CTGATTAAAG GAGTACGTAG CCATGATAAA
ACGTAA
 
Protein sequence
MMPQSLPDTT PPKRRFRWPT GMPQLAALLL VLLVDSLVAP HFWQVVLQDG RLFGSPIDIL 
NRAAPVALLA IGMTLVIATG GIDLSVGAVM AIAGATTAAM TVAGFSLPIV LLSALGTGIL
AGLWNGILVA ILKIQPFVAT LILMVAGRGV AQLITAGQIV TFNSPDLSWF GSGSLLFLPT
PVIIAVLTLL LFWLLTRKTA LGMFIEAVGI NIRAAKNAGV NTRIIVMLTY VLSGLCAAIA
GIIVAADIRG ADANNAGLWL ELDAILAVVI GGGSLMGGRF NLLLSVVGAL IIQGMNTGIL
LSGFPPEMNQ VVKAVVVLCV LIVQSQRFIS LIKGVRSHDK T