Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4453 |
Symbol | |
ID | 5592352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4458684 |
End bp | 4459526 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640923551 |
Product | AP endonuclease |
Protein accession | YP_001460992 |
Protein GI | 157163674 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000000121679 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGATC TGTTACAACG CCCGGATTTA TTCAGTATCA ATACCGCAAC ACTGGGCTAT AAAACGCCGC TACCCGCCAT TATTGATGCC TGCGCCGCGC GTGGTATTGG CGCGATTGCT CCCTGGCGCA GGGAGTTGCA AGGTGAAGAT CTCCAGCAAA TCGCCCACCA GCTTGCCGCC AGTAACATGA GCGTTTCCGG TTTGTGCCGT AGCACTTACT ACACCGCGCC GACACTGGCG GAACGCAAAC TGGCGATTGA TGATAACCGC CGGGCGCTGG ACGACGCAGC GGTGCTTAAC GCCGCCTGTT ATATGCAGGT GGTTGGCGGT CTGCCAACGG GCACAAAAGA TCTGTACGAA GCGCGGGAAC AAGTAAAACA AGGGATTCGC CAGTTGCTGC CACATTCGAA AGATGTCGGC GTGCCAATTG CGCTGGAGCC ACTGCACCCG ATGACAGCTG CCGATCGCTC TTGCCTGTGC ACGTTACGCC AGGCGCTGGA CTGGTGTGAT GAACTCGATC CCGATGGTGA GTTTGGCCTC GGCGTGGCGG TGGATGTTTA TCACGTCTGG TGGGATCCGG ATCTCGCCAG TCAGATCCTG CGTGCCGGAA AACGCATCCT CGCGTTTCAT GTTTCCGACT GGTTAGTGCC GACCACTGAT CTGGTCAATG ACCGTGGTAT GCCGGGAGAT GGCGTCATCA ATATTCCGTC AATTCGTCGG CTGGTTGAAA ACGCCGGATT TAATGGTGCT ATTGAACTGG AAATATTCTC GCCTTACTGG TGGCAGAAAG ATATTAACAG CACGCTGGAT ATTAGCGTCG ATCGCATCGC GCATTATTGT TAA
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Protein sequence | MRDLLQRPDL FSINTATLGY KTPLPAIIDA CAARGIGAIA PWRRELQGED LQQIAHQLAA SNMSVSGLCR STYYTAPTLA ERKLAIDDNR RALDDAAVLN AACYMQVVGG LPTGTKDLYE AREQVKQGIR QLLPHSKDVG VPIALEPLHP MTAADRSCLC TLRQALDWCD ELDPDGEFGL GVAVDVYHVW WDPDLASQIL RAGKRILAFH VSDWLVPTTD LVNDRGMPGD GVINIPSIRR LVENAGFNGA IELEIFSPYW WQKDINSTLD ISVDRIAHYC
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