Gene EcHS_A4437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4437 
SymbolulaA 
ID5594317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp4444716 
End bp4446113 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content53% 
IMG OID640923535 
ProductPTS system ascorbate-specific transporter subunit IIC 
Protein accessionYP_001460976 
Protein GI157163658 
COG category[S] Function unknown 
COG ID[COG3037] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATCC TCTACAACAT CTTTACCGTG TTTTTTAACC AGGTCATGAC CAATGCCCCG 
TTGTTGCTGG GTATTGTGAC CTGTCTGGGC TACATCCTAC TGCGCAAAAG TGTCAGCGTT
ATTATTAAAG GCACGATTAA AACCATAATT GGTTTCATGT TGTTGCAGGC AGGGTCCGGC
ATCCTCACCA GCACCTTCAA ACCGGTGGTG GCGAAAATGT CCGAAGTCTA CGGCATTAAC
GGCGCAATTT CCGATACTTA CGCGTCGATG ATGGCAACCA TCGACCGCAT GGGCGATGCC
TATAGCTGGG TAGGGTACGC GGTGCTGCTG GCACTGGCGC TGAACATTTG TTACGTGCTG
CTGCGTCGTA TTACCGGTAT TCGCACCATC ATGCTGACCG GCCACATCAT GTTCCAGCAG
GCGGGGCTGA TTGCCGTTAC GTTGTTTATT TTCGGCTATT CCATGTGGAC GACCATTATC
TGTACGGCGA TTCTGGTTTC GCTCTACTGG GGCATTACCT CCAACATGAT GTACAAACCG
ACTCAGGAAG TCACCGACGG CTGCGGTTTC TCCATTGGTC ACCAGCAGCA GTTTGCATCA
TGGGTTGCTT ATAAAGTCGC GCCGTTCCTG GGCAAAAAAG AGGAGAGCGT TGAAGATCTC
AAACTGCCTG GCTGGCTGAA CATTTTCCAC GACAACATCG TCTCCACGGC GATTGTCATG
ACCATCTTCT TTGGTGCCAT TCTGCTCTCC TTCGGTATCG ACACCGTGCA GGCGATGGCA
GGCAAAGTGA ACTGGACGGT CTACATCCTG CAAACCGGTT TCTCCTTCGC GGTGGCGATC
TTCATCATCA CTCAGGGCGT GCGCATGTTT GTGGCGGAAC TCTCTGAAGC ATTTAACGGC
ATTTCCCAGC GCCTGATCCC AGGTGCGGTT CTGGCGATTG ACTGTGCGGC TATCTATAGC
TTCGCGCCGA ACGCCGTGGT CTGGGGGTTT ATGTGGGGCA CCATCGGTCA GCTGATTGCG
GTTGGCATCC TGGTCGCCTG CGGTTCCTCG ATCCTGATTA TCCCAGGCTT TATCCCGATG
TTCTTCTCCA ACGCCACCAT CGGCGTGTTC GCTAACCACT TCGGCGGCTG GCGTGCGGCG
CTGAAGATTT GTCTGGTGAT GGGGATGATC GAAATCTTTG GTTGCGTCTG GGCGGTGAAA
CTTACCGGTA TGAGTGCCTG GATGGGTATG GCGGACTGGT CGATTCTGGC ACCGCCGATG
ATGCAGGGCT TCTTCTCCAT CGGTATCGCC TTTATGGCCG TCATCATTGT AATTGCACTG
GCTTATATGT TCTTCGCTGG CCGCGCACTG CGCGCAGAAG AAGATGCAGA AAAACAACTG
GCAGAACAGT CTGCTTAA
 
Protein sequence
MEILYNIFTV FFNQVMTNAP LLLGIVTCLG YILLRKSVSV IIKGTIKTII GFMLLQAGSG 
ILTSTFKPVV AKMSEVYGIN GAISDTYASM MATIDRMGDA YSWVGYAVLL ALALNICYVL
LRRITGIRTI MLTGHIMFQQ AGLIAVTLFI FGYSMWTTII CTAILVSLYW GITSNMMYKP
TQEVTDGCGF SIGHQQQFAS WVAYKVAPFL GKKEESVEDL KLPGWLNIFH DNIVSTAIVM
TIFFGAILLS FGIDTVQAMA GKVNWTVYIL QTGFSFAVAI FIITQGVRMF VAELSEAFNG
ISQRLIPGAV LAIDCAAIYS FAPNAVVWGF MWGTIGQLIA VGILVACGSS ILIIPGFIPM
FFSNATIGVF ANHFGGWRAA LKICLVMGMI EIFGCVWAVK LTGMSAWMGM ADWSILAPPM
MQGFFSIGIA FMAVIIVIAL AYMFFAGRAL RAEEDAEKQL AEQSA